Gene Hhal_1155 details

Gene Information

• Locus tag: Hhal_1155
• ID: 4710145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 1258837
• End bp: 1260816
• Gene Length: 1980 bp
• Protein Length: 659 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639855629
• Product: N-6 DNA methylase
• Protein accession: YP_001002733
• Protein GI: 121997946
• COG category: [V] Defense mechanisms
• COG ID: [COG0286] Type I restriction-modification system methyltransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACACCG AGAATCACTC CCAGATGGCC GGATTCATCT GGTCGGTCGC CGACCTGCTG 
CGCGGCGATC TCAAGCAATC CCAGTACGGA CGGGTCATCT TGCCGTTTAC CCTGCTGCGG 
CGGCTGGAGT GCGTCCTGGA GCCGACCAAG GAGCAGGTGC TGGCCGCGGC GAAGGAGCAC 
GCGGACAAGC CGCTGGGGGT GCGCGAGCGG CTTCTGCGCC GGGCGGCCGA TCAGCCTTTC 
TTCAACACCT CGCCGCTGAC CCTGGGGACG CTGTCGGACA CGCAGACCGC GGACGACCTG 
ATGAGCTACG TCCAGTCGTT CAGCCCCGAT GCCCGAGAGG TCTTTGAGCA CTTCAACTTC 
GAGGACTTCG TCCAGCAGCT CTCGGCGAAC AATCTGCTCT ACCAGGTGGT GCAGCGCTTC 
GCGGCCATGG ATCTCAGCCC CGGGCGGATC TCCAACTTCG GCATGGGCTC GATCTTCGAG 
GAGCTGATCC GCAAGTTCGC CGAGAGCTCC AACGAGACCG CCGGTGAGCA CTTCACGCCC 
CGCGACGTGG TCCACCTGAC CACCTCGCTG GTGCTCACCG ATCAGGACGA CAAGCTGCAA 
CCGCACAGCG TGGTCACGGT CTATGACCCG GCCGCCGGCA CGGGTGGCTT CCTCTCCGAG 
AGTGACGCCT ACATCCAGCA GGTCAGCGAT AACGTGACCG TTTCGCTGCA CGGCCAGGAG 
CTCAACCCGG AGTCCTACGC CATCTGCAAG GCGGACATGC TGATCAAGGG CCAGCAGGTC 
GAGAACATCA AGCTCGGCAA CACCCTCTCC GACGACGAGC TCGCCGGCGA GCGCTTCGAC 
TTCATGCTTG CCAATCCGCC CTTCGGCGTG GAGTGGAAGA AGGTCCAGAA GCAGGTCACC 
GACGAGCACA AGCGCTGGGG GTACAACGGC CGCTTCGGAC CGGGCCTGCC CCGGGTCTCC 
GACGGCTCCC TGCTATTTCT GCTGCACCTG GTGAGCAAGG TCCGCGATCC GCGGGAGGGT 
GGCTCGCGCA TCGGCATCAT CCTCAACGGC TCCCCGCTGT TCACCGGCGG GGCCGGTAGC 
GGCGAGTCGG AGATCCGTCG CTTCCTGCTT GAGCGCGACC TGGTGGAGGC CATCGTCGCC 
CTGCCCACGG ACATGTTCTA CAACACCGGC ATCGCCACCT ACGTCTGGAT CCTCTCCAAC 
GACAAGCCGC CGGAGCGCCG CGGTCGGGTG CAGCTGATCA ACGCCACCGA GCGTTACAGC 
AAGATGCGCA AGTCGCTCGG ATCCAAGCGG CAGTACATCG ACGATACAAA CATCGACAAC 
ATCGTCCGCC TCTACGGCGC CTTCGAGGAG AGCGAAGAGA GTAAGCTCTT CCCGGTGGCG 
GAGTTCGGCT ACCGGCGGAT CACCGTCGAG CGGCCCCTGC GGCTCAACTT CCAGGCCAGC 
GAGGAGCGCA TCCGCCGGAT CCTCGACGAG AAGCCGATCC AGAAACTCGA CGAGGACACC 
CAGGCCCGCC TCCTGGCCGC CTGCGAGGCC ATGGACGGCC AGATGCTCTA CCGGGACCGG 
CAGGCGTTCA CCCGCGACCT GAAGCGTGCC CTGGAGGAGC GGGAAGTGAA GCTCGGCGCG 
CCACCGATGA AAGCGGTCCT CAACGCCTTA TCCGAGCGCG ACCCGGAGGC CAAGCCGTGC 
ACCGACGCCA AGGGCAACCC GGAGCCGGAC ACCAGCCTGC GTGACCACGA GAACGTGCCG 
CTGACCGAAT CCGTCTACGA CTATTTCGAG CGCGAGGTGC GCCCGCACGT CCCCGACGCC 
TGGATCGACG AGGCCAAGCG TGACGCCCAG GACGGCGAGG TGGGCATCGT CGGCTATGAG 
ATCCCCTTCA ACCGCCACTT CTACAAGTTC ACCCCGCCGC GCCCGCTCGA AGAGATCGAC 
GCGGACCTGA AGGTCTGCAC GGACCGGATC AAGCGGATGA TCGAGGAGCT GTCGGCATGA 

 

Protein sequence

MNTENHSQMA GFIWSVADLL RGDLKQSQYG RVILPFTLLR RLECVLEPTK EQVLAAAKEH 
ADKPLGVRER LLRRAADQPF FNTSPLTLGT LSDTQTADDL MSYVQSFSPD AREVFEHFNF 
EDFVQQLSAN NLLYQVVQRF AAMDLSPGRI SNFGMGSIFE ELIRKFAESS NETAGEHFTP 
RDVVHLTTSL VLTDQDDKLQ PHSVVTVYDP AAGTGGFLSE SDAYIQQVSD NVTVSLHGQE 
LNPESYAICK ADMLIKGQQV ENIKLGNTLS DDELAGERFD FMLANPPFGV EWKKVQKQVT 
DEHKRWGYNG RFGPGLPRVS DGSLLFLLHL VSKVRDPREG GSRIGIILNG SPLFTGGAGS 
GESEIRRFLL ERDLVEAIVA LPTDMFYNTG IATYVWILSN DKPPERRGRV QLINATERYS 
KMRKSLGSKR QYIDDTNIDN IVRLYGAFEE SEESKLFPVA EFGYRRITVE RPLRLNFQAS 
EERIRRILDE KPIQKLDEDT QARLLAACEA MDGQMLYRDR QAFTRDLKRA LEEREVKLGA 
PPMKAVLNAL SERDPEAKPC TDAKGNPEPD TSLRDHENVP LTESVYDYFE REVRPHVPDA 
WIDEAKRDAQ DGEVGIVGYE IPFNRHFYKF TPPRPLEEID ADLKVCTDRI KRMIEELSA