Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1140 |
Symbol | |
ID | 4710124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1238775 |
End bp | 1240973 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639855613 |
Product | AsmA family protein |
Protein accession | YP_001002718 |
Protein GI | 121997931 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.999799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCGGA TACTCAAGTG GCTCCTTTTC GCCGTGGTCG GGCTGTTCGC CCTGCTGGTG GTGGCAGCGA CGCTGGTCAG CGTGGTCTTC GACCCCAACG ACTATCGCGA CGACATCGCG GCGGCCGTCG AAGCGGAAAC CGGGCGCGAG TTGACCATCG AAGGGGACAT CCGACTCTCC TTCTTCCCCT GGCTGGGCCT GGAGGTGGGG CGCGTCACCC TCGCCGACCG GGAAGGATTC CATGAGGACC CCTTCCTCGA GGTGGAGCAG GCCGACGCGG CCGTCCGACT TTTGCCGCTG CTCTGGGGCC AGCTGGAGAC CCGGCTGTTA AGCATCGAGG CGCCCGTCGC CCGCCTGATG GTCAACGAAG AGGGCGAGGG GAACTGGGAG GACCTGGTGG CGCGCCTCGT CGATGACGAA GCCCCGCCGG CTGACCCCGA GGAGGAGGCA CCGGCGGGCG AGCTGCCGCC CATGCTTCGC GACGCCGCCT TCGGCGGGCT GCAGGTCCGC CGCGGTCAGC TGCTCTGGGA AGACCGCAGC ATCGATGACC GCAAGGAGGT CGAGCGCTTC GACCTGGATG TCGAGGCACT GCGACTGGGC CAGCCGGTGG CCCTGCAGGC CAGCTGGCTC GGCCACGGCG CCGAGCTGCC CAGGATCGAC GGACAGCTGC GCCTGCAGGC CACCCTGGAC CAGGCCATGG AACAGCTCGA CCTGGACGGG CTGGAGATGC TGGTGGACGC TCAGGGGGAC CAGGTGCCGG GTCGGCAGCA GCGCCTGGGC GTGACCGGCA ACGGCCGTAT CGGCCTGGGC GCCCCCCTGC GGATCGAGTG GCCGGAGCTG GAAGTCACCG GGGCGGGGAT CGCCCTGGAG GCAGCGGCCG ATCTGGAGCT GGACGGCACC GGGGCCCACG GTCAGCTCGA CTGGCAACTG CCGGCGTTCA ACCTGCGCAC CGCCCTCAGC CGGCTGGACA TCGGCCTGCC CACCCCGGCG GACCCCACGG CAATGACCCG CGTGGGCGGT GCCGGCCTCA TCGAGTTCGA CGGCCAGCGT CTGCTCCTGC CCGAATTCGG TCTGGACCTC GATGACACGC GGATCGACCT CGATGGCGGG GTGGACGACT GGACCGGCCC CGAGGTCACG CTCAATCTGA CCGTGGACGA GATCAACCTG GACCGGTACC TGCCCGCCGA GGAACGGCGC GCCGTCGACG AGCCGACGGC ACCCGACGCG GGGCTGCCGG ACCTGGAAGA GATCGCCCTC GATCTGCCGC TGGAGCCGCT GCGCACCCTG GAGCTCGACG GCGGGCTGCA GATCGGCCAG CTGATCCTCT CCGGGCTCTC CCTGCAGGAG GTCCGGGGCG ACTTCAGCGG CAGCGACGGC CGTGTGGGCA TCGCCGACCT CGAGGCCCGG CTCTATGATG GCGACTACCG CGCCGACACC TTCCTCGACG CACGCGGCGA CTATCCGTAC TTCGAACTCG ACCACCGCCT GGACCAGGTG CAGTTCGCGC CGCTGCTCGA GGATCTCCTC GAACGGGACT GGCTCCACGG GCGGGGCAGC TTCGCCCTGC AGGGCGAGGG CGGCGGCGAG AACCTTGAAC AGCTGATCGA GGACTTCCGC GGCGATGCCG AGCTCAATGT CACCGAGGGG GCCGTACTGG GGCTGAACAT CCCGCACATG TTCCGCGAGG GTGTAGCCCG CGTCCGCGCC CAGCCCCGGC CCGAACCGCC GGAGGACGAG GCACGCACGG ATTTCGGCTC CCTCTCGGCC AGTTTCGAGC TGCGCGACGG CGAGATCCAC AACGACAACC TGCGCGCCGA ATCGCCGATC CTTCGCGCCC GTGGCGCCGG TCACGCCAAC CTGCTCAGGG AGACCATCGA CTACCGCGTA CGCCTATCGG TGATCGACAA CCTGGAGGAC GCCGACGGCC GCCCGATCCG CGAACTCAAG GACGTCACCG TGCCCCTGGA GTTCAGCGGA GACCTGTTCA GCCCACGCAT CCGCTTCGAC CTCCGCGCTG CGCTGACCGA GCAGGAGATC CGGCGTCTGC GCGAGGCCCA GCAGCGCCTC GACGAGGCCG AGGAGAAGAT CCGCGAGGGC TTCCGGGAGC GCATTGAACA GGAGCTCGAG GAGCAGACCG ACCGCGCCGA GGAGCGCATC CGTCAGGAGG CGGACAGCAT CCTGCGGCGG CTTCGCTGA
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Protein sequence | MLRILKWLLF AVVGLFALLV VAATLVSVVF DPNDYRDDIA AAVEAETGRE LTIEGDIRLS FFPWLGLEVG RVTLADREGF HEDPFLEVEQ ADAAVRLLPL LWGQLETRLL SIEAPVARLM VNEEGEGNWE DLVARLVDDE APPADPEEEA PAGELPPMLR DAAFGGLQVR RGQLLWEDRS IDDRKEVERF DLDVEALRLG QPVALQASWL GHGAELPRID GQLRLQATLD QAMEQLDLDG LEMLVDAQGD QVPGRQQRLG VTGNGRIGLG APLRIEWPEL EVTGAGIALE AAADLELDGT GAHGQLDWQL PAFNLRTALS RLDIGLPTPA DPTAMTRVGG AGLIEFDGQR LLLPEFGLDL DDTRIDLDGG VDDWTGPEVT LNLTVDEINL DRYLPAEERR AVDEPTAPDA GLPDLEEIAL DLPLEPLRTL ELDGGLQIGQ LILSGLSLQE VRGDFSGSDG RVGIADLEAR LYDGDYRADT FLDARGDYPY FELDHRLDQV QFAPLLEDLL ERDWLHGRGS FALQGEGGGE NLEQLIEDFR GDAELNVTEG AVLGLNIPHM FREGVARVRA QPRPEPPEDE ARTDFGSLSA SFELRDGEIH NDNLRAESPI LRARGAGHAN LLRETIDYRV RLSVIDNLED ADGRPIRELK DVTVPLEFSG DLFSPRIRFD LRAALTEQEI RRLREAQQRL DEAEEKIREG FRERIEQELE EQTDRAEERI RQEADSILRR LR
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