| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1135 |
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| Symbol | |
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| ID | 4710117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1233295 |
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| End bp | 1235328 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639855607 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001002713 |
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| Protein GI | 121997926 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.643084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCCTT CCGGCGGTTA TCGTGGCTTC GTCCTGGTCG CACTGTTCCT GGTCCTCGGC
CTCTCCGCAG GGGTCGCCGG TCCGGATCGG GGCTGTCCGG ACGCCGACCA CGGTGAACGC
TTCCACGAGG CCCTGGAGGC GGCCCGGGAC GATGATTGGT CCCGGGTAGC GGAGCTGGAG
CCCTGCCTGG GTGATCCGCA CCCGATGGCT GCTTACCTGG AGTTCCACCG CCTGCGCAGC
GCCCTGCCCG AGCTCGATCC CCGGCGGGTG GTGGATTATC AACAGCGCCA TGCCGATACG
CCGCTGGCCG ATGTCCTCAA GCGCGTCGCC GTGCGCCGTT ACGCCGAGGC CGGGGATGAC
GCGGCGGTGC GTCGGGTCAC CGACGAGCCG CCGTCCCGCC TGGCGTTGCG TTGCCACTGG
TGGCAGGCCC ATCTGGAGAC GCGCCGGGGC GAGGCCCTGG CCTTTGCCCG GAGTGCCTGG
CATGCCGGGG TGTCGCGGCC GGCAGCCTGC GACGGCCTGT TCGAGGCGGC CCGCGAGGCT
GGCGTCATCG ATGATCGGGC CGTCTGGCAG CGCATGCGCC TGGCCTTCCG CAATGACCAG
CCGGGACTGC TGCGTTATTT GGAAGGTCTG CTCGGCGGCG AGCGTTGGTT GGCTGCCGCC
GAGTGGCTGT ACCGTCTTGA GCAGCAGCCG ACGCGGGTCG GTGACGTGGA TGAGGGGTTG
CCACCGCGCC TGCGCCGTCA GGTGACCGCC GACGGGCTCT ACCGGCTGGC CCGGGAAGAC
ACGGTGGCGG CCCGCGAGTA CCTGGAACGG ATCGGGGAGG ATCTGCCGGA TCTACCGGCC
GGCGAGCGCC GGGAGGTGTT CGAGCGCGTC GCCTGGTACT CGATCATCCG CGGCGTCCCC
GAGAACCGGG GGTGGGTCGA CCGCTGGCTG GCCGAGCACG GCGGCGAGGA ACTCCTGGAG
CAGCGCATGC GCCGCGCGGT GATCGAGGAG CACTGGACCG ACCTGGTCTT CTGGTCGGCG
CGCCTGTCGG AGGGGTCCGT CCGCACCGCC CGTTGGCAGT ACTGGCTCGG GCGGGCCCAA
CTCGAGTTGG GCGATGCGGC ACGGGCTCGG GAGCATTGGC GAGAGGCGGC CGGGCAGCGC
TCCTTCTGGG GGTTCCTGGC CGCCGAGCAC ATCGGTCAAG CCTATGCGCT ACAGGAAGTG
AGCTCGGAGC CGGATCCGCC CGCTCCGGAT CCGGCGTTGC TGCGGGTGCG CCTGCTCTAC
CAGGTCGGGG AGTTGCGTCT GGCCCGGGAC GAATGGGGCC GCCTGTTGCA GGATCGCGGT
GCGGCCGAGC AGCAAGCCCT GGCGGCCCAC GCCTACAGGC AGGGCTGGTA TGAGTTGGCC
ATAGCGGCTG CCAATCGGGC CGGAGCGGTC GAGGCCCTGC AGTGGCGCTT CCCCCACGCC
TACCGCGACG CCTTCCAGCG GGTGGCGGCG GATACCGGCG TCGAATCGTG CCTGTTGATG
GCAGTGGCTC GACGCGAATC GGCCTTCCAT CGTGATGCCG TCTCTCCGGC CGGGGCCCGC
GGACTGATGC AGCTGCTGCC AGGAACCGCG CGGCAGTTGG CCGAGGAGGG TGGCCGGCCA
GGGCCGGATG TGGGCGGACT ATTCGATCCC GAGCTCAATG TTCGCCTGGG CGCCGAGTAC
CTGCAGAAGC TGCTGGAGCG GTTCGATGGC AACCGGCTCA AGGCCCTGGC GGCCTACAAT
GCCGGCCCGA GCCGGGTAGC CGGTTGGCTG GAGCAGGAAG GGCGGCCGCT GGACGTGTGG
ATCGAATCGA TCCCCTACCA TGAGACCCGC CGCTATGTGC AGGCGGTGCT GGCCTACCGG
ACCATCCTGG CCCATCGTGG CGGGCTGGAG CAGGTGGCGT CAGTGGTCTC CCGCGACGAG
GTGGCCCAGG TGTACGGTGA GGCCGTCGAC GGTCGCGAAC CGGCGGCGGT GCGCCTGAGC
CGGAACCCGA TGGGTGAAGC GATGCCCCCG GGGGATGGCC GCCGGGAAGA CTGA
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| Protein sequence | MVPSGGYRGF VLVALFLVLG LSAGVAGPDR GCPDADHGER FHEALEAARD DDWSRVAELE
PCLGDPHPMA AYLEFHRLRS ALPELDPRRV VDYQQRHADT PLADVLKRVA VRRYAEAGDD
AAVRRVTDEP PSRLALRCHW WQAHLETRRG EALAFARSAW HAGVSRPAAC DGLFEAAREA
GVIDDRAVWQ RMRLAFRNDQ PGLLRYLEGL LGGERWLAAA EWLYRLEQQP TRVGDVDEGL
PPRLRRQVTA DGLYRLARED TVAAREYLER IGEDLPDLPA GERREVFERV AWYSIIRGVP
ENRGWVDRWL AEHGGEELLE QRMRRAVIEE HWTDLVFWSA RLSEGSVRTA RWQYWLGRAQ
LELGDAARAR EHWREAAGQR SFWGFLAAEH IGQAYALQEV SSEPDPPAPD PALLRVRLLY
QVGELRLARD EWGRLLQDRG AAEQQALAAH AYRQGWYELA IAAANRAGAV EALQWRFPHA
YRDAFQRVAA DTGVESCLLM AVARRESAFH RDAVSPAGAR GLMQLLPGTA RQLAEEGGRP
GPDVGGLFDP ELNVRLGAEY LQKLLERFDG NRLKALAAYN AGPSRVAGWL EQEGRPLDVW
IESIPYHETR RYVQAVLAYR TILAHRGGLE QVASVVSRDE VAQVYGEAVD GREPAAVRLS
RNPMGEAMPP GDGRRED
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