Gene Hhal_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1134 
Symbol 
ID4710116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1232136 
End bp1233221 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content67% 
IMG OID639855606 
Producthypothetical protein 
Protein accessionYP_001002712 
Protein GI121997925 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.504348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGAGTC GCACCAGCGT TAGGGAAACG GACGTGACCA TACTGAACCA GAACGGGGGG 
CCCTCCACCT GGCATTGGCT GGTGGGCGGA GCTGCTGTCG TGATCATCCT GGCCGGGCTC
CAGGCGGTCT CCGGCATCGT CAATCCACTA CTGCTGGCGG CGTTCCTGGC CATCGCCTCG
GCGACGCCGC TGAACTGGAT GCAGCGACGC GGCGTGCCCG CGGTCTTGGC GGTGATGATC
CTCTTCCTTG GCGTGGGGCT GCTCTTCTTC CTGCTCTTCC ACGCTCTGCG TGGCGCGGTG
GAGACCATGG CCACCCAGGC GCCGGAGTAT CAGGAGCAGT TGACCATCGT CTTCGGCCAG
CTGCGTGAGT ACGTCGTATC CATGGGGGTG CCGCCGGAGA GCCTCCCCGA GCAGATTCCG
CTGCCGGCGG TGGGGACGCT TACCGATGCG GCGGCGACGG TCGCCAGCGG TATCGGTCAG
TTTACGGCGG CCACCTTCCT GGTGCTGCTC GCCTTCATGT TCCTGCTCCT GGAAGAGAGC
ACGTTGCCCG GCAAACTCTC GGTCGCCTTC CCCGCCAGCC GTCGGGCGCG GGTGCGTACC
CGGCGGTTCC TGCGCGCGGT CGATCGCTAC ATCTTCATCA AGAGCGCCAC CAGTACCCTG
ACCGGCGTGA TCATCGGTAC CGGGTTGTGG CTCATCGGCG TGGATTTCCC GATCCTCTGG
GGGATCTTCG CCGGGCTGCT GAATTTTATC CCCACGGTGG GGTCGATCAT CGCCGCCGCC
CCTGCGGTGG CGGTGGCCCT GCTCGGTGGG GGGCTGCTCG ATGCGGTGCT GACGGTGGCC
CTGTATGTGG CGGTGAACGT GGCCATCGGC AGCATTACCG AGCCGCGCCT GATGGGGCGC
ACCCTGGGGC TGTCGCCGCT GGTGGTGCTG ATCTCGTTGA TGGTCTGGGG GTGGGTGTTC
GGGCCGGTCG GGATGTTGCT GTCGATCCCG CTGACCATGA TCGCCAAGCT GGCCCTGGAG
GCGCAGCCAG AGACTCGCTG GATCGCCGTG CTGCTGAGCG ACCGCGCCGA TGAGCGGATC
CGCTGA
 
Protein sequence
MWSRTSVRET DVTILNQNGG PSTWHWLVGG AAVVIILAGL QAVSGIVNPL LLAAFLAIAS 
ATPLNWMQRR GVPAVLAVMI LFLGVGLLFF LLFHALRGAV ETMATQAPEY QEQLTIVFGQ
LREYVVSMGV PPESLPEQIP LPAVGTLTDA AATVASGIGQ FTAATFLVLL AFMFLLLEES
TLPGKLSVAF PASRRARVRT RRFLRAVDRY IFIKSATSTL TGVIIGTGLW LIGVDFPILW
GIFAGLLNFI PTVGSIIAAA PAVAVALLGG GLLDAVLTVA LYVAVNVAIG SITEPRLMGR
TLGLSPLVVL ISLMVWGWVF GPVGMLLSIP LTMIAKLALE AQPETRWIAV LLSDRADERI
R