| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1127 |
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| Symbol | |
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| ID | 4710091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1225240 |
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| End bp | 1226913 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639855599 |
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| Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_001002705 |
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| Protein GI | 121997918 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCACCG AGGACCTCAA CGCCACCTGG GCTGGCAGCC TGCTCGATCG GCTACGCGGT
CACGGCGTGC ACGACGTCTG CATCGCCCCT GGGAGCCGCA GCGCTCCCCT GGCACTGGCC
GCGGCGCGAC GCGCCGACCG TGGCGACGAC CTGACCCTGC ACACCCACTT CGATGAGCGC
GGACTGGCCT TCTACGCCCT AGGCCTGATC CGCGCCAGCC GGCGACCGGT GGCGGTGATC
ACCACCTCGG GAACGGCAGC GCCGAACCTC CACCCCGCCG TGGCCGAGGC CAGGCAGAGT
AGCCTACCCC TGGTGGTGAT CACCGCCGAC CGCCCCCCCG AGCTGCACCA CTGCGGTGCC
AACCAGGCCA TGCCGCAGGA AGACCTGTTC GCCCCCCTGG TGCGCGCGGC ACTGGCCCTG
CCACCCCCCG AGGCCACGCT CTGCGGCCAC TGGCTGAACC GCCGCCTGGA CGCCACCCTG
GCCGAGGCCA CGGGCGCCGG GGCCACCGGC CCGATCCACC TGAACGTGCC GCTGCGCGAG
CCGCTCTACG GCGGCACGGA ACACCCTCCG GTGGCGCCGC CGCTGCCACC CCGGCGCGCC
CCCCGGGCGG CTGCGCCGCC CCTGGGCCCG GCAGAGCCGC CCCAGCTGTT CGTCGCCGGC
GGACTGAACC CCGAGGAGGC CGAGGCAGTC CTCGAGACCG CTGCTGCCGG CAATATCCCG
ATCCTCGCCG ATCCCAGCAG CCAACTGCGC CTGCGCGCAC ACCCCTGCAT CCTCGGCGGG
GCCGAACACC TGCTGGCCAC CGCCGCCGGC CGCGCGGCCC TGGGTCAGGC GCGCCAGGTG
GTGCAGTTCG GCGGCCGGCT CACCGGCCGC CGCCTGCCGG CGTGGCTGAC CGAGCACGCG
CCGCAGCGCT GGCTGATCAC CGGGGATGAC CACGACCTGG ATCCCGACTG GCAGGCCACC
ACCGTCCAGG CGGATATCGC CACCGCGGCC CGGGCCCTGC GCCCCGCCGC GCCCCAGCCA
CCGCTGCCCG GGCTCACCGA AGCGCTGACC AGAGTGGCCG AGACCCGCTC TGCAGCGCTG
GCCAACGAGC CATTCGCCGA GCCAGCCGCC ACCGAGCGAC TCAGCCGGAC CCTGCCCCCG
GGGATGGCGC TGTTCGCTGG CAACAGCCTG CCCATCCGGG CCGTCGACCT GTTCGCCGTG
GCGAAGCACG GCAATCCCTG CGTCACCCAG CGCGGGGTCA GCGGCATCGA CGGACTGATC
GCCACCGCCG CGGGTTTCGC CCACCACCAC CCGGACGGCG TCACCCTGGT GATCGGCGAC
CTATCGGCCC TCCACGACCT CAACAGCCTG GCTCTGCTCG ACCAGGCCCG GCACACCTGC
GTAGTGGTGG TGCTCAACAA CGACGGTGGC GGCATCTTCG ATCTGCTGCC GGCCCGCAGC
GAGGGCGACG ACGCACACCG CCGTCTGTTC CGCATGCCCC ACGGCTACGG GTTCTCCCAG
GCCGCCGCAC AATTCCGCCT GCCCTACTGG CAGTGCACCG ACGGCGACAG CCTCGAGGCA
GCCCATCGCG AGGCGTGCAC CCGTCCCGGC GGCAGCGTCA TCGAGGTGGC CTGCCCGCCC
GGCGCCGGGA GCGAACAGAT GGCCAACCTA TTCCGCACGC TCGAGGCGCT GTGA
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| Protein sequence | MRTEDLNATW AGSLLDRLRG HGVHDVCIAP GSRSAPLALA AARRADRGDD LTLHTHFDER
GLAFYALGLI RASRRPVAVI TTSGTAAPNL HPAVAEARQS SLPLVVITAD RPPELHHCGA
NQAMPQEDLF APLVRAALAL PPPEATLCGH WLNRRLDATL AEATGAGATG PIHLNVPLRE
PLYGGTEHPP VAPPLPPRRA PRAAAPPLGP AEPPQLFVAG GLNPEEAEAV LETAAAGNIP
ILADPSSQLR LRAHPCILGG AEHLLATAAG RAALGQARQV VQFGGRLTGR RLPAWLTEHA
PQRWLITGDD HDLDPDWQAT TVQADIATAA RALRPAAPQP PLPGLTEALT RVAETRSAAL
ANEPFAEPAA TERLSRTLPP GMALFAGNSL PIRAVDLFAV AKHGNPCVTQ RGVSGIDGLI
ATAAGFAHHH PDGVTLVIGD LSALHDLNSL ALLDQARHTC VVVVLNNDGG GIFDLLPARS
EGDDAHRRLF RMPHGYGFSQ AAAQFRLPYW QCTDGDSLEA AHREACTRPG GSVIEVACPP
GAGSEQMANL FRTLEAL
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