| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1109 |
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| Symbol | |
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| ID | 4710055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1205837 |
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| End bp | 1208392 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855581 |
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| Product | alpha-glucan phosphorylases |
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| Protein accession | YP_001002687 |
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| Protein GI | 121997900 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.407099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAC GCGTCTTCAC CCTGGAAGTC CACCCCAATC TGCCACCCTC ACTCGGCCGC
CTGCGCGAGC TCGTCGACGA CCTCTACTAC TCGTGGGATC GGCGCGTGCG GGGCTTGTTC
TACCAGATCG ACCCGGAATG CTGGGAGGCC AGCGGCCACA ACCCCAAGGT GTTCCTGCGG
CGGGTGTCTC AGGAAGCGCT GGAGCGGGCC GCCCAGGATC CGACCTTTAT TGAGGATTAC
AACCGGACAC TCTCCGCCTA CGACACCTAC CTGGAGCAGG AGACTTCGCC GGAGGTGACC
CCGCACCTGG ATCCGGGACA GGACCTGGTG GCCTACTTCT GTGCCGAGTT CGGGCTCCAC
GAGAGCCTGC CCCTCTACTC CGGGGGGCTG GGGATCCTGG CCGGTGACCA CTGCAAGGCC
GCCAGCGATC TGCGCGTACC GTTGGTTGCC GTGGGCCTGC TCTACCGTCA GGGCTACTTC
ATCCAGACCA TCGATCATGA AGGGTGTCAG GTCGCCCACT ACGTACCCAC CGAAGTGGCC
CAGCTGCCCG CCTACCCGCG TCAGGACGGC GACGGCGAGG AGCTGCGCGT GTTCGTCGAG
TTGCCCGGGC GCACGGTTCA GCTGCGCATC TGGTCAGTGC GGGCCGGGCA CGTGCGCCTC
TATATGCTCG ATAGCGATGT TCCGGAGAAC CGCCCCGAAG ATCGCTCGAT CACCTATCAG
CTTTACGGCG GCGGCAGCGA GATGCGGATC AAGCAGGAAC TCTGCCTCGG TATCGGCGGG
GTGCGGGCGC TGCGCAAGCT GGGCGTGATG CCCACGGTCT GGCATCTCAA CGAGGGCCAT
TCGGCCTTTC AGCTCGTCGA GCGTTGCCGC GAGTGGGTGG CCGCCGGCAC TGACTTCGCC
ACGGCCCTGG AGGTGGTCGC CGGGACCTCG GTTTTCACCA CGCATACCCC GGTGGCGGCT
GGGCACGACA TCTTCGACCC GGAGATGGTG CGGGAGTATC TGGACGCCGC GCTGGGAGAG
AGCGGGCTGG ATCTCGATGC CCTGCTGGAG CTGGGTAACG GCCGGGCCGA GCATCCGGGC
TTCAACATGA CCAGCCTGGC CCTGCGGGGG TCGCGCTTTC ACAACGGCGT CAGCCGGATC
CACGGCCGCG TGGCCTCGGA GATGGAGGCC CGCATATGGC CGGATGTCCC GGCTCAACAG
AACCCCATCC ACTCCATCAC CAACGGCGTC CATGTGCCGA CCTTCCTCGC CCAGGAGTGG
GGCAACCTCT TCGATCAGCG CTGGCCGGCC TGGCGGAGTG AGCTGAGCAA TGAGGCGTTT
TGGAGCGTCG TCGACGAACT GCCCGACCAT CGCTACTGGA GCATGCGCCA GAGCCTGAAG
TCGCAGATGC TCCGCGATGT CTGTGCCCGG GTCGAGGCCC GATGCAAGCG CAACGGCATG
GCCGAGGCCA TGATCCGCCG CATGACCCGC TATATCCGTG ATCCCGAGGC CGATGTGCTG
GTGCTCGGCT TCGCCCGCCG CTTCGCGACC TACAAGCGGG CTCTGCTGAT CTTCCGCGAC
CTGGACCGGC TCAAGCAGCT GCTCAACGAC CCCGAGCGGC CGATGATCCT GATCTTTGCC
GGCAAGGCGC ATCCGCACGA CGAGCAGGGT CAGGCGATGA TCCAGCGCAT CCACGAGCTG
ACCCTGGATC CCGATCTGAT CGGCCGGCTG CTGCTGCTCG AGAACTACGA CATGGCGCTG
GCCCGCAAGC TGGTGACCGG GGTTGATGTG TGGCTGAACA ACCCGGAGTA CCCCCTCGAG
GCGTGCGGGA CGTCCGGCCA GAAGGCGGCC ATCAACGGCG TGATCAACCT CTCGGTCCTG
GACGGCTGGT GGGACGAGGG CTACGCCGGC GATAACGGTT GGGCCATCTA CCCCCACGCC
CCGGGGTTCG ATCCGGATTA CCGCGACGGT GAGGAGGCCC GGGACCTCCT GGATACGCTG
GCCGGCGAGG TGGCGCCGCT CTACTACGAT CGCGGCGAGC GTGGCTATTC GGCCGGCTGG
GTGCAGATGT CCAAGGCGTC GATGCGCAGC ACGTTGCCCC GCTTCAATGC CCAGCGCATG
GTCATGGACT ATGTGCGCGA CCTCTACGGC CCGGCCGCCC GGCAGCAAAG GCGTCTGGCG
GAGGAAGAGC TGGCGGGGGC GGCCGGGCTG GCGGCGTGGA AGGAGCACGT CCTGGCCTGC
TGGGACGGGA CGGCCCTGGA GCTGGTCGAC GACGCCCCTG CCAGTCTGTA TCACGGCGAG
TCCCTGCGCC TGCGGGTCAA GGCGCAGCTC AATGGCCTCC GGGCCGAGGA TGTCACCGTC
GAGTGCCGTT TCAGCCCGGT GCCCCACCCG CGGGATCCGG CCCGGACCCA GCGGTTCGTC
CTCTCGGCCA CGGACCAGGA TGACGCCGGG GATCCGCTCT TCACCCTCGA CATCCAGCCA
CGGCTCAACG GCCTGCAGTA CTTCCGCATC TGCATGTATC CCAGCCACCC GCTGCTCGCG
CACCCGCTGG AGCTGGGGCG GATGCGTTGG CTCTAG
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| Protein sequence | MSERVFTLEV HPNLPPSLGR LRELVDDLYY SWDRRVRGLF YQIDPECWEA SGHNPKVFLR
RVSQEALERA AQDPTFIEDY NRTLSAYDTY LEQETSPEVT PHLDPGQDLV AYFCAEFGLH
ESLPLYSGGL GILAGDHCKA ASDLRVPLVA VGLLYRQGYF IQTIDHEGCQ VAHYVPTEVA
QLPAYPRQDG DGEELRVFVE LPGRTVQLRI WSVRAGHVRL YMLDSDVPEN RPEDRSITYQ
LYGGGSEMRI KQELCLGIGG VRALRKLGVM PTVWHLNEGH SAFQLVERCR EWVAAGTDFA
TALEVVAGTS VFTTHTPVAA GHDIFDPEMV REYLDAALGE SGLDLDALLE LGNGRAEHPG
FNMTSLALRG SRFHNGVSRI HGRVASEMEA RIWPDVPAQQ NPIHSITNGV HVPTFLAQEW
GNLFDQRWPA WRSELSNEAF WSVVDELPDH RYWSMRQSLK SQMLRDVCAR VEARCKRNGM
AEAMIRRMTR YIRDPEADVL VLGFARRFAT YKRALLIFRD LDRLKQLLND PERPMILIFA
GKAHPHDEQG QAMIQRIHEL TLDPDLIGRL LLLENYDMAL ARKLVTGVDV WLNNPEYPLE
ACGTSGQKAA INGVINLSVL DGWWDEGYAG DNGWAIYPHA PGFDPDYRDG EEARDLLDTL
AGEVAPLYYD RGERGYSAGW VQMSKASMRS TLPRFNAQRM VMDYVRDLYG PAARQQRRLA
EEELAGAAGL AAWKEHVLAC WDGTALELVD DAPASLYHGE SLRLRVKAQL NGLRAEDVTV
ECRFSPVPHP RDPARTQRFV LSATDQDDAG DPLFTLDIQP RLNGLQYFRI CMYPSHPLLA
HPLELGRMRW L
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