Gene Hhal_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1102 
Symbol 
ID4709389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1194985 
End bp1195404 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content69% 
IMG OID639855574 
Producthypothetical protein 
Protein accessionYP_001002680 
Protein GI121997893 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.495108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG AACAGCAGAC CCTCACTGTC CAGACCCGCG GACGCGGCAC CCATGAGCTC 
ACCCGCTCGT TGGCCGAGGC GATCCGCGAG CAGGGCGTGA CCCGCGGCCT GGCGCACGCC
TTCTGCCACC ACACCAGCGC CTCGCTGATG ATCACCGAGA ACGCCGACCC CACGGTCCGT
GCCGACCTGG AGCGGTTCAT GGCCCGGGTG GCGCCGGATG GCGACCCGAT GTACGAGCAC
GATATGGAGG GCCCGGACGA CATGCCGGCC CACATTCGCA GCGTGCTCAG TGGCAGCGGC
GTCACTGTGC CGATCAGCAG CGGCCGGCCG GCGCTGGGGA CCTGGCAGGG CCTCTACCTC
TGGGAGCACC GCAGCGCAGG GCACAGCCGG AAGGTGACGC TGACGTTGTT CGGGGAGTGA
 
Protein sequence
MKIEQQTLTV QTRGRGTHEL TRSLAEAIRE QGVTRGLAHA FCHHTSASLM ITENADPTVR 
ADLERFMARV APDGDPMYEH DMEGPDDMPA HIRSVLSGSG VTVPISSGRP ALGTWQGLYL
WEHRSAGHSR KVTLTLFGE