Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1083 |
Symbol | |
ID | 4709875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1176407 |
End bp | 1177246 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639855554 |
Product | protein of unknown function DUF306, Meta and HslJ |
Protein accession | YP_001002661 |
Protein GI | 121997874 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3187] Heat shock protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCC TTCGTACCTT CGCTCCCGCC GTTACTGTCT GGCTGATGCT GCTCTTGCTG GCCGCCTGCG CTGCCCCCGA ACAGGCGCCG GACGCCGAGG TGGTCCCGGC CCCCGAGGAG ACGCCCCCAG CTCCGTCGGC GGAGTCCGCC GAGACGCCGG ACACCGCGCC GGAGCCGGCG CCGGGGCTGG GTACCGTCGA CCAATCCTTC GTCGCTCGTG GCCAGGAACC TGGCTGGATG CTGCGCATGG ACGGGGAGCA GCTGCGTCTG CTGGCCGACT ACGGCCAGGT CGAGGTCACC GCCGAGCAAC CCGCCCCGGA GACCACGGAC GCGGGTCAGC GTTATACCGC CGAGACCGAC GACGGTCGGT CGTTGGAGGT GGTGGTCGAG CAGGCGCTGT GCGCCGACTT GGCCACGGGC ATGCCGCACC CCTATCGGGT GCACTACCAG CTCGACGGCG AAGGGCACCG TGGCTGCGGC GGCGATCCCC ACGCGTTGCT GACCGACGGC GGGTGGCAGA TCGTCGCCGT CGACGGCCAG TCCCCCGAGA CGGTGGTGAC CCTGAGCTTC GATTGCGAGG GAAGGGTGCA CGGGCAGGCG CCGTGCAATC GTTACCTGGG CGGCTACCGG CTCACCGGCG AGCGGATCGT ATTCAGTGGC CTGGCCGCCA CCCGCATGGC CTGCAGTGAT GCCGACCTGA CCGAGGCCGA GCAGCGCTAT CTCGGCGTGC TGGCGGATGT CCATTTCCTC TACATGCCCG ACGAGGACCG TCTGCGGTTG ATGACCGCCG ACGGGAGGCG CCTTGAGGCG ATCCGCACGG GGGCCGAGGG GGCGCCGTGA
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Protein sequence | MTALRTFAPA VTVWLMLLLL AACAAPEQAP DAEVVPAPEE TPPAPSAESA ETPDTAPEPA PGLGTVDQSF VARGQEPGWM LRMDGEQLRL LADYGQVEVT AEQPAPETTD AGQRYTAETD DGRSLEVVVE QALCADLATG MPHPYRVHYQ LDGEGHRGCG GDPHALLTDG GWQIVAVDGQ SPETVVTLSF DCEGRVHGQA PCNRYLGGYR LTGERIVFSG LAATRMACSD ADLTEAEQRY LGVLADVHFL YMPDEDRLRL MTADGRRLEA IRTGAEGAP
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