Gene Hhal_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1083 
Symbol 
ID4709875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1176407 
End bp1177246 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content71% 
IMG OID639855554 
Productprotein of unknown function DUF306, Meta and HslJ 
Protein accessionYP_001002661 
Protein GI121997874 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3187] Heat shock protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCC TTCGTACCTT CGCTCCCGCC GTTACTGTCT GGCTGATGCT GCTCTTGCTG 
GCCGCCTGCG CTGCCCCCGA ACAGGCGCCG GACGCCGAGG TGGTCCCGGC CCCCGAGGAG
ACGCCCCCAG CTCCGTCGGC GGAGTCCGCC GAGACGCCGG ACACCGCGCC GGAGCCGGCG
CCGGGGCTGG GTACCGTCGA CCAATCCTTC GTCGCTCGTG GCCAGGAACC TGGCTGGATG
CTGCGCATGG ACGGGGAGCA GCTGCGTCTG CTGGCCGACT ACGGCCAGGT CGAGGTCACC
GCCGAGCAAC CCGCCCCGGA GACCACGGAC GCGGGTCAGC GTTATACCGC CGAGACCGAC
GACGGTCGGT CGTTGGAGGT GGTGGTCGAG CAGGCGCTGT GCGCCGACTT GGCCACGGGC
ATGCCGCACC CCTATCGGGT GCACTACCAG CTCGACGGCG AAGGGCACCG TGGCTGCGGC
GGCGATCCCC ACGCGTTGCT GACCGACGGC GGGTGGCAGA TCGTCGCCGT CGACGGCCAG
TCCCCCGAGA CGGTGGTGAC CCTGAGCTTC GATTGCGAGG GAAGGGTGCA CGGGCAGGCG
CCGTGCAATC GTTACCTGGG CGGCTACCGG CTCACCGGCG AGCGGATCGT ATTCAGTGGC
CTGGCCGCCA CCCGCATGGC CTGCAGTGAT GCCGACCTGA CCGAGGCCGA GCAGCGCTAT
CTCGGCGTGC TGGCGGATGT CCATTTCCTC TACATGCCCG ACGAGGACCG TCTGCGGTTG
ATGACCGCCG ACGGGAGGCG CCTTGAGGCG ATCCGCACGG GGGCCGAGGG GGCGCCGTGA
 
Protein sequence
MTALRTFAPA VTVWLMLLLL AACAAPEQAP DAEVVPAPEE TPPAPSAESA ETPDTAPEPA 
PGLGTVDQSF VARGQEPGWM LRMDGEQLRL LADYGQVEVT AEQPAPETTD AGQRYTAETD
DGRSLEVVVE QALCADLATG MPHPYRVHYQ LDGEGHRGCG GDPHALLTDG GWQIVAVDGQ
SPETVVTLSF DCEGRVHGQA PCNRYLGGYR LTGERIVFSG LAATRMACSD ADLTEAEQRY
LGVLADVHFL YMPDEDRLRL MTADGRRLEA IRTGAEGAP