Gene Hhal_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1079 
Symbol 
ID4709871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1173833 
End bp1174414 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content74% 
IMG OID639855550 
Productmethyltransferase type 11 
Protein accessionYP_001002657 
Protein GI121997870 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.233586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGGCG TCGAGCGTAT CCCGTGGCTC TATGACACCG GCATGGCCGT CTGCGAGCGC 
CTGGGCATGG GTCGCTGGCG CCAGGCGCTG GTCGACGGGG CCCGGGGTCG GGTCCTGGAG
GTGGGGTGCG GGACCGGGCG GACACTGCCA CTGTACCCGG CAGGGACCAC GGTCTGGGGC
ATCGATCCGG ACGCCGCAGC CCTGCGCCGG GCCCGGCGCA GGGCGCCGCA GGCCCCGCTG
TGCGTGGGTC GCGCCGAGGC GCTGCCCTTC CCGGCGGGCC ACTTCGACAC CGTCACCACC
AGCCTGAGCT TCTGCAGCGT GGGGGACGTG GCGGCGGGGC TGGCGGAGAT CCGTCGGGTC
CTCGACGGCG ACGGGGTGCT GCGCATGCTC GAGCATGTCC GCTCTCCGGG GCTGGCGGGC
CGGATCCAGG ATCGCATCCA GCCGGCCTGG ACCACGCTGA GCGGCGGCTG CCACTTGAAC
CGCGATACCG AAGCGGCCGT CCGAGCGGCG GGGTTCCGGA TCGACGACGC CTCGCGCCAG
GCCCGCGGGG TCATGCGCTG CTTCGCCGCT TATAAGGTGT AG
 
Protein sequence
MRGVERIPWL YDTGMAVCER LGMGRWRQAL VDGARGRVLE VGCGTGRTLP LYPAGTTVWG 
IDPDAAALRR ARRRAPQAPL CVGRAEALPF PAGHFDTVTT SLSFCSVGDV AAGLAEIRRV
LDGDGVLRML EHVRSPGLAG RIQDRIQPAW TTLSGGCHLN RDTEAAVRAA GFRIDDASRQ
ARGVMRCFAA YKV