Gene Hhal_1077 details

Gene Information

• Locus tag: Hhal_1077
• ID: 4709869
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1171833
• End bp: 1172810
• Gene Length: 978 bp
• Protein Length: 325 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639855548
• Product: oligopeptide/dipeptide ABC transporter, ATPase subunit
• Protein accession: YP_001002655
• Protein GI: 121997868
• COG category: [E] Amino acid transport and metabolism; [P] Inorganic ion transport and metabolism
• COG ID: [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
• TIGRFAM ID: [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0268479
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGCG CTCCGCTGCT CGAGATCGAG AATCTGCGCC TGGGGTACGC CACCGAGCGC 
GGCACACTCT GGGCGGTCGA CGGCGTCCAC CTTGAGGTGC GCCGCAATGA GGCCCTGGCC 
ATACTCGGCG AATCCGGCTG CGGCAAGAGC TCGCTGGCTC GAACCCTGCT GCGCACCCTG 
CCGCGCAACG CCCACGCCCC CAGCGGACAG ATGCGCCTGG ACGGGCGCGA GGTGCTCGGC 
CTTTCGGAAG AGCGCTTTCG CCGCGAGGTG CGCTGGGTGC GGATCGCCCT GGTGATGCAG 
GCCGCCATGA ACGCCCTCAA CCCAGTGGTG CGGGTGGGCG AGCAGGTCGC CGAACCGCTG 
CGGGTCCATC ATCGACTGGG CCGGCGGGAG GCCCAGCGGC GGGCCGCGGC CGCCTTCGAA 
GAGGTCGGCA TCGCCACGGA CTTCCTGCGC CGCTACCCCC ACGAACTCTC CGGCGGCATG 
CGCCAACGGG CCGTGCTGGC TATGGCCCTG GTCACCGAAC CGGATCTGGT CATCCTCGAT 
GAGCCCACCT CAGCCCTCGA CGTGCTGACC CAGGCGTCGA TCATGAACGT GCTCAAGCGC 
ATCAAGGCCG AACGCGGGGT CAGCTTCGTG CTGATCACCC ACGACATCGC CACCTCCAGC 
GAGCTCGCCG ACCGCGTGGC CCTGATGTAC GCCGGCCAGG TGGTGGAGAC CGCCAGCGCC 
GGGGCATTCT TCGGCGAGCC CGCTCACCCT TACTCACGGC TGCTGATGGA CTCGGTCCCG 
CGGCTCCATC AGGAGGAGCC GCCCCGCGCC ATCCCCGGAA GCCCGCCGAG CCTGCTCGAG 
CCTCCGCGCG GCTGCCGTTT CGCCGAGCGC TGCCCAAAGG CCTTCGAGCG CTGCAGCGAG 
CCGCCCCCGG AGGTGGCCTA CGACACCCGC CACTGGGTTC GTTGCTGGCT TCACCACCGC 
TCGGGAGGGG GACAATGA 

 

Protein sequence

MAGAPLLEIE NLRLGYATER GTLWAVDGVH LEVRRNEALA ILGESGCGKS SLARTLLRTL 
PRNAHAPSGQ MRLDGREVLG LSEERFRREV RWVRIALVMQ AAMNALNPVV RVGEQVAEPL 
RVHHRLGRRE AQRRAAAAFE EVGIATDFLR RYPHELSGGM RQRAVLAMAL VTEPDLVILD 
EPTSALDVLT QASIMNVLKR IKAERGVSFV LITHDIATSS ELADRVALMY AGQVVETASA 
GAFFGEPAHP YSRLLMDSVP RLHQEEPPRA IPGSPPSLLE PPRGCRFAER CPKAFERCSE 
PPPEVAYDTR HWVRCWLHHR SGGGQ