| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1067 |
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| Symbol | |
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| ID | 4709845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1159009 |
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| End bp | 1160445 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639855538 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001002645 |
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| Protein GI | 121997858 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.315299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACAC CACTCTACGA ACGGGTGGCC GAGACGCTGG CTCATCAGAT CGAGCAGGGC
GTCTACGCGC CCGGGGATCG TCTGCCCGGA CTGCGGCGTC TGCGCCGGCA CTTCGGGGTG
AGCATGGCCA CCATCGTCGC CGCCTGCGAA CTCCTTGAGC AGCGCGAGGT CCTCGAGGCC
CGACCCCGCT CGGGGTTCTT CGTCCGCGAA CGGGCGACAG CGAGCGCAGC CCCCAGCGAG
CAAGTGGACG AGGTGGATGC GCCGAGTCTG GTGCTCGGCC AGGAGCGCGT CCTCGACCTG
GTGCGCGCCC ACCACGAGCC GGATGTGGTC TCGCTGGGGG CGGCCGCAGC GCCGGCGGCG
TTCCTCCCGG CCGCGGCCAT GGACCGCAGC TTCGCCCGGG TGCGTCGCCG CCAGCGCGAG
CGGGTCAATG CCTACGACTT CCCGCCGGGG TGTGCCGAGC TGCGCACCCA GATCGCCCGC
CGCATGGCCT ACGCCGGCTG CAGCCTGTCT CCGGACGACA TCGTGCTCAC CGCCGGGTGC
CAGGAAGCGA TCACCCTGAG CCTGCGCGCC GTGGCCGAGC CCGGCGACGT GGTGGCCATC
GAGTCGCCGA CCTTCTACGG CATCCTTCAG GCCATCGAGT CCCAGGGCAT GCAGGCCCTG
GAGGTGGCCA CGGACCCGCA TTCCGGGATG ATCCCCGAGG CGCTGGAACG GGCCCTGTCG
CGTTGGTCGA TCCGCGCCTG TGTGCTGATG CCCACCTTCG GCAATCCGTT GGGGCACGCC
ACCCCGGAGT CGCGCAAGCA GGAGCTGGTG GGGGTGCTCA GCGCCCACGG CGTGCCCTTA
ATCGAGGACG ATGTCTACGG TGAGCTGGCC TTCGACGGTA CCCGGCCGTG GGCAGCGAAG
GCCTTCGACG CCCACGGCGA GGTGCTCTAC TGCAGTTCCT TTTCCAAGGT CCTCGGTGCC
GGGCTGCGGG TCGGCTGGGT CGCGCCGGGC CGTTACCGGG ACCGCCTGGT CTATCTCAAG
TACGCGACCA GTCAGGCCAC TTGTACCCTG AGTTCGTTGG CGGTGGCCGA CTACCTGGAG
CAGGGCGGCT ACGACCGCTT CCTGCGCCGG GCCCGGCGCA ACTACGAGCG GCATGTGCGC
TGGGTGGCCG GCCTGGTACG CCGCCACTTC CCGGAGGGCA CCCGGGTGAC GCGGCCGCGG
GGCGGTTTCG TGGTGTGGGT GGAGCTCCCG GCCGGCTGCG ATAGCCTGGA GCTGCAGCGC
CGCGCCCTGG CCGAGGGAAT CAGCATCGCC CCCGGTCCCG TCTTCTCGCC CACCGGCCGG
TACGGACGCT GCCTGCGGCT CAACTGCGCC CAGGCCGACG TGCCGGCGAC AGAGTGGGCG
CTGCAGCGGC TCGGCGCCCT GGCCATCGGC GAGGATCGCG GCGACGTGCG CGGCTGA
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| Protein sequence | MTTPLYERVA ETLAHQIEQG VYAPGDRLPG LRRLRRHFGV SMATIVAACE LLEQREVLEA
RPRSGFFVRE RATASAAPSE QVDEVDAPSL VLGQERVLDL VRAHHEPDVV SLGAAAAPAA
FLPAAAMDRS FARVRRRQRE RVNAYDFPPG CAELRTQIAR RMAYAGCSLS PDDIVLTAGC
QEAITLSLRA VAEPGDVVAI ESPTFYGILQ AIESQGMQAL EVATDPHSGM IPEALERALS
RWSIRACVLM PTFGNPLGHA TPESRKQELV GVLSAHGVPL IEDDVYGELA FDGTRPWAAK
AFDAHGEVLY CSSFSKVLGA GLRVGWVAPG RYRDRLVYLK YATSQATCTL SSLAVADYLE
QGGYDRFLRR ARRNYERHVR WVAGLVRRHF PEGTRVTRPR GGFVVWVELP AGCDSLELQR
RALAEGISIA PGPVFSPTGR YGRCLRLNCA QADVPATEWA LQRLGALAIG EDRGDVRG
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