Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1058 |
Symbol | |
ID | 4709824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1146729 |
End bp | 1147823 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639855529 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001002636 |
Protein GI | 121997849 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAGCT CTGAGCTCAA GAACGATCGA ATCCTGCGCG CTTTCCAGCG CCAGCCCGTG GACCGGACCC CGGTCTGGAT GATGCGCCAG GCCGGCCGCT ATCTGGCCGA ATATCGAGAG GTGCGGGCCC AGGCCGGCAG CTTCATGGGC CTGTGCCGCA GCCCCGAGCT GGCGGCCCGG GTGACCATGC AGCCGCTGGA GCGCTACGAG CTCGACGCCG CCATTCTCTT CTCGGACATC CTCACCATCC CCGAGGCCAT GGGGCTCGGC CTGAACTTCG TCACCGGCGA GGGGCCGGTC TTCGAGCACC GGGTCAAGAC CGCCGCCGAC ATCGACCGGC TGCCCCAGCC CTCGGCCCAG AAAGAGCTGC GCTACGTCAT GGATGCGGTG GCAGCCTGCC GCAAGGAGCT GAACGGACAG GTGCCGCTGA TCGGCTTCAC CGGCAGCCCG TGGACCCTGG CCACTTACAT GATCGAAGGC GGCTCGAGCA AGACCTTCGC CGCCAGCAAG AGTCTGCTCT TCAACGAGCC GGAGGCCGCG CACCGGCTGA TGGCCAAGCT CGCCGACACC GTGGCCGACT ACCTCAACGG CCAGGTAGAG GCTGGCGCGC AGGCGCTGAT GATCTTTGAC ACCTGGGGCG GGGCCCTGGA TCCGGTGCGT TACCGGGAGT TCTCGCTGGC CTATATGCAG CGCATCCTCG AGCAACTCCC CCGCGAGCGC GAGGGGCGTC GTATCCCGGT CACCCTGTTC ACCAAGGGCG GCGGCCAGTG GCTGGAGGAT ATCGCCGACA CCGGCTGTGA CGGCGTCGGC CTCGACTGGA CGACCTCGCT GGCCGACGCC CGGCGCCGGA TCGGCGGCCG GGTGGCCCTG CAGGGGAACC TCGATCCGTG CATGCTCCAC GCCAACCCCG AGGTCATCCG CCGCGAGGTG GCCCGCTGCC TGGAAGAGTT CGGCCACGGT CCGGGCCACG TGTTCAACCT TGGCCACGGC ATCCAGCCGG AGACGCCGCC GGAGAATGTC GATGCCATGA TCCGGGCCCT CCACGAACTC TCGCCGGCCT ACCATGACGC AACGGCCACC TCGGCCACGT CGTAG
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Protein sequence | MSSSELKNDR ILRAFQRQPV DRTPVWMMRQ AGRYLAEYRE VRAQAGSFMG LCRSPELAAR VTMQPLERYE LDAAILFSDI LTIPEAMGLG LNFVTGEGPV FEHRVKTAAD IDRLPQPSAQ KELRYVMDAV AACRKELNGQ VPLIGFTGSP WTLATYMIEG GSSKTFAASK SLLFNEPEAA HRLMAKLADT VADYLNGQVE AGAQALMIFD TWGGALDPVR YREFSLAYMQ RILEQLPRER EGRRIPVTLF TKGGGQWLED IADTGCDGVG LDWTTSLADA RRRIGGRVAL QGNLDPCMLH ANPEVIRREV ARCLEEFGHG PGHVFNLGHG IQPETPPENV DAMIRALHEL SPAYHDATAT SATS
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