Gene Hhal_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1052 
Symbol 
ID4709808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1137330 
End bp1138004 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID639855523 
Producthypothetical protein 
Protein accessionYP_001002630 
Protein GI121997843 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00170442 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAGTT ACTTCGCCCG GATCTTCGGC TCCTCACCGG TCGCCCCTCT GCAGCAGCAC 
ATGGCCGAGG TGGTCGACTG CGTGGAGGTG CTGCCGGAGC TTTTCCGGGC CTCGGCGGTG
GGCGACGTGC AGCGCATGCG CGACGCCCAC CGCCAGATCG TCCACCACGA GCACGAGGCG
GATCGGCTGA AGAAGGAGAT CCGCGCCCAC CTCCCCCCGG ACCTGTTCAT GCCCTGGGAC
CGGCGCGACT TCCTAGAGCT GCTGCGCGCC CAGGACCGTA TCGCCAATAA GAGCAAGGAC
ATCGCCGGGC TGATGATCGG CCGCCAGATG CAGTGGCCAT CGGCCCTGAT CGAGGCCACC
CTCGGCCTGC TCGACCAGGG CATCGAGGCG GCACGCCAGG CTAAGGCCTC GGTGCGCGAA
CTCGACGAAC TGGTCGAGGC TGGCTTCCGC GGTGCGGAAC TGGAGATCGT CGAGAGCCTG
CTGGAAAAAC TCGACGACGT CGAAGCAGAG ACCGATCGCA TGCAGGTCCA GCTGCGCTCG
CAGCTGTTCG AGATCGAGCG CGACCTCTAC CCGGTGGACG TCATGTTCCT CTACCAGATC
ATCGAGGCTC TGGGCACCCT GGCCGATCGT GCGCAACAGA CCGGCGCACG GTTCCAGATC
CTGCTCGCAC GCTGA
 
Protein sequence
MKSYFARIFG SSPVAPLQQH MAEVVDCVEV LPELFRASAV GDVQRMRDAH RQIVHHEHEA 
DRLKKEIRAH LPPDLFMPWD RRDFLELLRA QDRIANKSKD IAGLMIGRQM QWPSALIEAT
LGLLDQGIEA ARQAKASVRE LDELVEAGFR GAELEIVESL LEKLDDVEAE TDRMQVQLRS
QLFEIERDLY PVDVMFLYQI IEALGTLADR AQQTGARFQI LLAR