Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1035 |
Symbol | |
ID | 4709771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1115007 |
End bp | 1116788 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639855506 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001002613 |
Protein GI | 121997826 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.356313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGC AACAGGTCAA GGTACCGGAT ATCGGCGGCT TCGAGGCCGT AGAGGTTATC GAGGTGCTGG TCGGCCCCGG GGATCGGATC GAGTCCGAAC AGTCGCTGAT CACGCTGGAG TCCGACAAGG CGAGCATGGA GGTGCCGGCC TCCGCCGCCG GCGTGGTCCG CGAGGTCCAT GTGGCGGTGG GCGACACCGT CTCCGAAGGG GCGCCCATCC TGACCCTCGA GGCGGAGGCG GAGGCGGACG CGGCAGGTGG CAACGAGGAG CGCGCGGCGC CCCCGGGCGA GTCGGCCGAG GCGCCGTCGC CGGGTCCGGT CGAGCCGACC GCGCCAGCCC CGGCGGCGGC AGCTGCTGGC GCGCCGCAGG ACCCGGACTG CGACGTGGTG GTCCTGGGGG CGGGGCCGGG CGGCTACAGT GCCGCCTTTC GGGCCGCCGA TCTGGGCCTG AAGGTGGTGC TGGTGGATCG CTACCCGGTC CTCGGCGGCG TCTGCCTCAA CGTCGGGTGT ATCCCCTCCA AGGCGCTGCT CCACGCCGCC AAGGTGGTGG ACGAGGCCGA TCAATTCGCT GCCCACGGGA TCGCCTTCGG CAAGCCGAAG ATCGATCTGG AGCAGCTCAA CGACTGGAAG CGCGGCATCA TCAAGCAGCT GACCCAGGGG CTGGCGGGGA TCGCCAAGCA GCGCAAGGTC GAGGTGGTCA CCGGCGAAGC GGCCTTTGCC GACGCCCACC ACCTGCACGT GTCGGGGGAC GACGGCGCAC GCACGATCAG CTTCCGGCAC TGCATCGTCG CGGCCGGCTC GCGTCCGGCG ATCCCGCCGT CGCTGGCGGT GGACGATCCG CGGGTGATGG ACTCCACCGG TGCGCTCAAG CTTGAGGAGA TCCCGGACCG GCTGTTGGTG GTCGGTGGCG GCATCATCGG TCTGGAGATG GCCTCGGTCT ACTCCGGGCT GGGTAGCAAG GTCACCGTTG TCGAACTCTC CGACCGGCTC ATGCCGGGAG CCGATCCGGA CCTGGTCAAG GTGCTGCGCA AGCGCCTGGC CAAACGCTGT GAGGCGATCC ACCTGAACAC CGAGGTGACC GGGGTCAAGG CCAACAAGAA GTCGCTGACC GTCACCATGA ACGGTCAGGA CGCGCCGGAG AGCGACCGCT TCGATCGCAT CCTGGTGGCC GTCGGCCGCC GCCCGAACAG TGACCGGATC GGGGTTGAGG CCGCCGGCCT GGCGCCGGGG GAGGACGGGT GCCTGAGCGT GGACGAGCAC ATGCGTACCG CGGTGCCGCA TATTCACGCC GTGGGCGATA TCGTCGGCCA GCCCATGCTG GCGCACAAGG CGGTGCACGA GGGTAAGGTG GCCGCCGAGG TGATCGCCGG CGAGAAGAGT GCCTGGGACG CCCGGGCCAT CCCGTCGGTG GCCTACACCG ATCCGGAGGT CGCCTGGGTG GGGCTGACCG AGGAGCAGGC GAAGGCCGAG GGGGTGGCCT ACGAGAAGGG GGCCTTCCCG TGGGCGGCCA ATGGCCGTGC GCTGTCGCTG GATGCCAGTG ACGGTGTTTC CAAGATCCTC TTCGATGCGG AGACCGGGCG GGTGCTCGGC GGCGGCATTG TCGGCCCCGG CGCCGGCGAT CTGATCGGCG AGATCGGTCT GGCCCTGGAG ATGGGGGCGG ACGCCCACGA CATCGGTCTG ACGGTTCATC CCCACCCGAC GCTCTCCGAG ACGGTGGCTA TGGCGGCGGA GATGGCCAGC GGCAGCATCA CCGACCTGCT ACCGCCGAAG AAGCGCAAGT AG
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Protein sequence | MAEQQVKVPD IGGFEAVEVI EVLVGPGDRI ESEQSLITLE SDKASMEVPA SAAGVVREVH VAVGDTVSEG APILTLEAEA EADAAGGNEE RAAPPGESAE APSPGPVEPT APAPAAAAAG APQDPDCDVV VLGAGPGGYS AAFRAADLGL KVVLVDRYPV LGGVCLNVGC IPSKALLHAA KVVDEADQFA AHGIAFGKPK IDLEQLNDWK RGIIKQLTQG LAGIAKQRKV EVVTGEAAFA DAHHLHVSGD DGARTISFRH CIVAAGSRPA IPPSLAVDDP RVMDSTGALK LEEIPDRLLV VGGGIIGLEM ASVYSGLGSK VTVVELSDRL MPGADPDLVK VLRKRLAKRC EAIHLNTEVT GVKANKKSLT VTMNGQDAPE SDRFDRILVA VGRRPNSDRI GVEAAGLAPG EDGCLSVDEH MRTAVPHIHA VGDIVGQPML AHKAVHEGKV AAEVIAGEKS AWDARAIPSV AYTDPEVAWV GLTEEQAKAE GVAYEKGAFP WAANGRALSL DASDGVSKIL FDAETGRVLG GGIVGPGAGD LIGEIGLALE MGADAHDIGL TVHPHPTLSE TVAMAAEMAS GSITDLLPPK KRK
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