Gene Hhal_1032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1032 
Symbol 
ID4709766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1112175 
End bp1112639 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content71% 
IMG OID639855503 
Productsterol-binding domain-containing protein 
Protein accessionYP_001002610 
Protein GI121997823 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.266214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC CGCAATTCGA TCAGGCCCTG CCGCTGCTGC TGACGCCGCT GCGCTTCGTG 
CCGGGGCCGG TCAATGCCGC GGTGGTGCCG GCGCTGCTGC AGCAGGTGCT GGCCGACGCC
CTGGCCGACG GTGAGCTGGA GATCCTGGTC GACCGGACCC TGGCTCTGGA GGTCACCGAT
GCCCGGCTGG CCTATGGCTT CACTCTCCGC GATGGACGGC TGGCCACGGC CGACCCTGCC
GGCGCGGATG TCACCATCCG CGGCGACGCT GCTGCCTTCC TGGCGCTGGC CGGTGGCGCG
GCCGACCCGG ACATGCTCTT CTTCCGGCGG CGGCTCAGCG TCGAGGGCGA TGTCGCCCTG
GGGCTGTCGG TGAAGAACCT CCTGGAGAGC TACGAGCCCC GTCATCGGCT GCCGGGCCCC
CTGTGCCGGG CCCTCGAAGC GGCGGCTGCC CGGGTCAAGG TCTAG
 
Protein sequence
MKRPQFDQAL PLLLTPLRFV PGPVNAAVVP ALLQQVLADA LADGELEILV DRTLALEVTD 
ARLAYGFTLR DGRLATADPA GADVTIRGDA AAFLALAGGA ADPDMLFFRR RLSVEGDVAL
GLSVKNLLES YEPRHRLPGP LCRALEAAAA RVKV