Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1032 |
Symbol | |
ID | 4709766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1112175 |
End bp | 1112639 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639855503 |
Product | sterol-binding domain-containing protein |
Protein accession | YP_001002610 |
Protein GI | 121997823 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3154] Putative lipid carrier protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.266214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAC CGCAATTCGA TCAGGCCCTG CCGCTGCTGC TGACGCCGCT GCGCTTCGTG CCGGGGCCGG TCAATGCCGC GGTGGTGCCG GCGCTGCTGC AGCAGGTGCT GGCCGACGCC CTGGCCGACG GTGAGCTGGA GATCCTGGTC GACCGGACCC TGGCTCTGGA GGTCACCGAT GCCCGGCTGG CCTATGGCTT CACTCTCCGC GATGGACGGC TGGCCACGGC CGACCCTGCC GGCGCGGATG TCACCATCCG CGGCGACGCT GCTGCCTTCC TGGCGCTGGC CGGTGGCGCG GCCGACCCGG ACATGCTCTT CTTCCGGCGG CGGCTCAGCG TCGAGGGCGA TGTCGCCCTG GGGCTGTCGG TGAAGAACCT CCTGGAGAGC TACGAGCCCC GTCATCGGCT GCCGGGCCCC CTGTGCCGGG CCCTCGAAGC GGCGGCTGCC CGGGTCAAGG TCTAG
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Protein sequence | MKRPQFDQAL PLLLTPLRFV PGPVNAAVVP ALLQQVLADA LADGELEILV DRTLALEVTD ARLAYGFTLR DGRLATADPA GADVTIRGDA AAFLALAGGA ADPDMLFFRR RLSVEGDVAL GLSVKNLLES YEPRHRLPGP LCRALEAAAA RVKV
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