Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1029 |
Symbol | |
ID | 4709643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1104071 |
End bp | 1106365 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639855500 |
Product | malic enzyme |
Protein accession | YP_001002607 |
Protein GI | 121997820 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACG ACTTCAAAGA AGCCGCGCTC GAATACCATC GGCAGCCGAC CCCCGGGAAG ATCGAGGTCA TCCCCAGCAA GCCGCTGGCC AACCAGCGTG ACCTCGCCCT GGCCTACTCC CCCGGGGTTG CCTCGGCCTG CGAAGCCATC GTCAACGACC CGCGCGAGGC GGCCGCCATG ACCGCCCGGG GCAACCTGGT GGCGGTCATC ACCAACGGTT CCGCCGTGCT CGGCCTGGGT AACATCGGTC CACTGGCGTC GAAACCGGTG ATGGAGGGCA AGGGTGTCCT GTTCAAGAAG TTCGCCGGAA TCGATGTCTT CGACATCGAG GTCGACGAGC CGGACGCCGA GCGCTTCGTC GACATCGTCT CCGCTCTGGA GCCGACCTTC GGCGGCATCA ATCTGGAGGA CATCAAGGCC CCGGAGTGCT TCGAGATCGA GGAGGCCCTC AAGCGCCGGA TGAACATCCC GGTGTTCCAC GATGATCAGC ACGGCACCGC CATCATCACT GCTGCGGCTA TCCGCAATGG CCTGCGCGTG GTGGGCAAGC GGCTCGAGGA CGTCACCCTG GTCTGCTCCG GCGCCGGTGC CGCGGCCATC GCCTGCCTCG ACCTGCTGGT GGCCATGGGG CTGCCCAAGG AGCAGATCAC CGTCACCGAT CGCAAGGGCG TGGTCTACAA GGGGCGCAAG GAGTACATGG ACCCGCGTAA GGAAGGCTAT GCCCGGGAGA CGGCCTCCCG CAGTCTGCGC GAGGTGATCG AGGGCGCGGA CATCTTCCTC GGGCTGTCGG CACCGGGGGT GCTGAATGCC GAGATGGTCC ACCTGATGGC CGATCAGCCG ATCATCATGG CGTTGGCCAA TCCGGTTCCC GAGATCCTCC CCGAGGAGGT GCGCGAGGCC CGGCCCGATG CGGTGATCGC CACCGGCCGC TCGGATTACC CCAACCAGGT GAACAACGTC CTCTGCTTCC CGTTCATCTT CCGCGGGGCG CTGGATGTGG GCGCCAGCGC CATCAACGAG GCGATGAAGA TCGCCGCGGT GGAGGCCATC GCCGACCTGG CTACCGAGGA GTCGTCCGAG GAGGTGGTGG CAGCCTACGG CGGCCGGCCC TGGAGCTTCG GCCCCGAGTA CCTGATTCCC AAGCCCTTCG ACCCCCGACT GATCAGCCGC GTGGCGCCGG CGGTGGCCCA AGCCGCCATG GAGAGCGGGG TGGCTTGCCG GCCGATCGCG GACTTCGAGG CCTACCGCCT GCAGCTGCAG CAGTACGTGT TCCAGTCCGG GCTGGTCATG AAGCCGATTT TCGAGCGCGC CCGGGAGCAG CCCAAGCGGG TGGTCTACAC CGACGGCGAA GAGGAGCGGA TCCTCCGTGC CGTGCAGCTG GTGGTCGACG AACAGCTTGC GCGGCCCATC GTCGTCGGGC GCCGGCGCGT GGTGGAGAAG CGGCTGCGCC AGCTCGGTTT GCGGGTACAG ATCGACGAGG ATTTCGAGCT GGTCGACCCC GAGGGCGACC CCCGCTACCG CGACTATTGG CAGGCGTACT ACCAGCTGAT GGCCCGGCGC GGCGTGACGC CGGCCCGGGC GCGGACGGTG GTGCGTACCC GCAACACGGT CATCGGCGCA CTGATGGTCC ATCTAGGCGA CGCCGACGCC CTGGTCGGCG GTATCGAGGG GCGCTATCAG CGGCAGATGC AGCACGTTCA GGACGTTATC GGCCGTCGCC GCGGGGTGCG CAACCTGGCG GCGATGAACG TGCTGATCAT GCCCAAGGGG ACCTTCTTCC TGGCGGACAC CTACGTCAAC CAGGATCCGA ACCCCCACGA GATCGCCGAG ATGACCTTGT TGGCTGCGGA CGAGGTGCGC CGTTTCGGAA CGGTGCCGAA GGTGGCGCTG CTCTCGCACT CGAACTTCGG TACCTCGTCG CAGCCCTCGG CGGAGAAGAT GCGCCACGCC CTGGAGCTGA TCCAGGACCG GGACCCGGCC CTCGAGGTGG AGGGCGAGAT GCACGGCGAC GCAGCGATCT CCGAGGAGGT GCGACGGCGC ATCTTCCCCG ATGCGCAGCT CGAGGGGGAG GCGAACCTGC TGATCATGCC GGGGCTCGAC GCCGCCAACA TCTCGTTCAA CCTGCTCAAG GCGACCACCG ACAGCGTCTC TGTCGGGCCG ATCCTGCTCG GGACCGCGAA ACCGGCCCAC CTGCTCACCC CGTCGTCCAC CGTTCGGGCC ATCGTCAACC TCACCGCCCT GTCCGTGGTC GAGGCGCAGA TGACCGATGC GGTGGAGCCG GAGAGGCATC CGTAG
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Protein sequence | MSDDFKEAAL EYHRQPTPGK IEVIPSKPLA NQRDLALAYS PGVASACEAI VNDPREAAAM TARGNLVAVI TNGSAVLGLG NIGPLASKPV MEGKGVLFKK FAGIDVFDIE VDEPDAERFV DIVSALEPTF GGINLEDIKA PECFEIEEAL KRRMNIPVFH DDQHGTAIIT AAAIRNGLRV VGKRLEDVTL VCSGAGAAAI ACLDLLVAMG LPKEQITVTD RKGVVYKGRK EYMDPRKEGY ARETASRSLR EVIEGADIFL GLSAPGVLNA EMVHLMADQP IIMALANPVP EILPEEVREA RPDAVIATGR SDYPNQVNNV LCFPFIFRGA LDVGASAINE AMKIAAVEAI ADLATEESSE EVVAAYGGRP WSFGPEYLIP KPFDPRLISR VAPAVAQAAM ESGVACRPIA DFEAYRLQLQ QYVFQSGLVM KPIFERAREQ PKRVVYTDGE EERILRAVQL VVDEQLARPI VVGRRRVVEK RLRQLGLRVQ IDEDFELVDP EGDPRYRDYW QAYYQLMARR GVTPARARTV VRTRNTVIGA LMVHLGDADA LVGGIEGRYQ RQMQHVQDVI GRRRGVRNLA AMNVLIMPKG TFFLADTYVN QDPNPHEIAE MTLLAADEVR RFGTVPKVAL LSHSNFGTSS QPSAEKMRHA LELIQDRDPA LEVEGEMHGD AAISEEVRRR IFPDAQLEGE ANLLIMPGLD AANISFNLLK ATTDSVSVGP ILLGTAKPAH LLTPSSTVRA IVNLTALSVV EAQMTDAVEP ERHP
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