Gene Hhal_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1016 
Symbol 
ID4709594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1087533 
End bp1088552 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content70% 
IMG OID639855487 
Productsuccinylglutamate desuccinylase/aspartoacylase 
Protein accessionYP_001002594 
Protein GI121997807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.105203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAGA CCTACCAGGG ACTGCCGAAG GGCCTGCTCG GCGCGGCGGC CCCGGAACTG 
GAGGACCGGC TCGGTGGGCC GAGTCTCATC GAGGTGCCCG GGCGCCGCGA GCCACCGCTG
TTTGTGACCG TCTTGCTCCA CGGCAACGAG ACGACCGGCT GGGAGGCGGT GCAGCGGGTG
CTGACCGAGT TCCAGGGACG GACGCCGCCG CGGTCCCTGC TGCTGTTCAT CGGCAACGTG
CGCGCGGCTC GGCACGGGGT GCGGCGATTG CCAGAGCAGC CTGATTATAA TCGGGTCTGG
CCGGGGACCA GTCTCCCCGA CAGCCCGGAG CAGCACCTGG CCGCCGAGGT GGTGGCGCGG
GTGCGCTCGC GGGGCTGTTT CGCCAGCATC GACGTCCACA ACAATACGGG CATGAACCCG
CACTACGGTT GCGTCAATCG CCTGGAGGGG CCTTACCTGC AGCTAGCGGC ACTGTTCTCG
CGCACCGTAG TCTACTTCAC GCGGCCGCAG GGGGTGCAGT CGCTGGCCCT GGCCCGTCTG
GCGCCGGCGA TCACGGTGGA ATGTGGGCAG CCGGGGAGCC CGGGGGCGGC GGAGCACGCG
GCCGAGCTGA TCTCCAGTGC GCTGCACCTG TCGCGCCTGC CGGAGGGGGT GCCCGGGGGG
ATTTCGGTCT ACCACACGGT GGCGGCGGTG CGGATCCCGG AGCAGTGCAG CTTCGGGTTC
GGCGATGTGC CGGGGGTCGA CCTGCAGCTG ATGGATGACC TGGAGCGGTG CAACTTCCGC
GATCTGCCCG AGGGTACGGT GTTCGCCCGG GCGGCGCCGG AGTCCCGGGC GTTCTTCACG
GTAGAGGACA ACGATGGCCG CGAGGCGGCG GCGGAGTTCT TTCAGCGCGA TGGCGATACG
ATCCGCCTGC GCCGTCCGGC CATGCCGGCC ATGCTCGCCT GCAATACGGC GGCCATCCGT
CAGGATGTGC TCTGCTACCT GATGGAGCCG GTCCACCTGA CCGGACGGGC CGGCGGTTGA
 
Protein sequence
MLKTYQGLPK GLLGAAAPEL EDRLGGPSLI EVPGRREPPL FVTVLLHGNE TTGWEAVQRV 
LTEFQGRTPP RSLLLFIGNV RAARHGVRRL PEQPDYNRVW PGTSLPDSPE QHLAAEVVAR
VRSRGCFASI DVHNNTGMNP HYGCVNRLEG PYLQLAALFS RTVVYFTRPQ GVQSLALARL
APAITVECGQ PGSPGAAEHA AELISSALHL SRLPEGVPGG ISVYHTVAAV RIPEQCSFGF
GDVPGVDLQL MDDLERCNFR DLPEGTVFAR AAPESRAFFT VEDNDGREAA AEFFQRDGDT
IRLRRPAMPA MLACNTAAIR QDVLCYLMEP VHLTGRAGG