Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1016 |
Symbol | |
ID | 4709594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1087533 |
End bp | 1088552 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639855487 |
Product | succinylglutamate desuccinylase/aspartoacylase |
Protein accession | YP_001002594 |
Protein GI | 121997807 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.105203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAGA CCTACCAGGG ACTGCCGAAG GGCCTGCTCG GCGCGGCGGC CCCGGAACTG GAGGACCGGC TCGGTGGGCC GAGTCTCATC GAGGTGCCCG GGCGCCGCGA GCCACCGCTG TTTGTGACCG TCTTGCTCCA CGGCAACGAG ACGACCGGCT GGGAGGCGGT GCAGCGGGTG CTGACCGAGT TCCAGGGACG GACGCCGCCG CGGTCCCTGC TGCTGTTCAT CGGCAACGTG CGCGCGGCTC GGCACGGGGT GCGGCGATTG CCAGAGCAGC CTGATTATAA TCGGGTCTGG CCGGGGACCA GTCTCCCCGA CAGCCCGGAG CAGCACCTGG CCGCCGAGGT GGTGGCGCGG GTGCGCTCGC GGGGCTGTTT CGCCAGCATC GACGTCCACA ACAATACGGG CATGAACCCG CACTACGGTT GCGTCAATCG CCTGGAGGGG CCTTACCTGC AGCTAGCGGC ACTGTTCTCG CGCACCGTAG TCTACTTCAC GCGGCCGCAG GGGGTGCAGT CGCTGGCCCT GGCCCGTCTG GCGCCGGCGA TCACGGTGGA ATGTGGGCAG CCGGGGAGCC CGGGGGCGGC GGAGCACGCG GCCGAGCTGA TCTCCAGTGC GCTGCACCTG TCGCGCCTGC CGGAGGGGGT GCCCGGGGGG ATTTCGGTCT ACCACACGGT GGCGGCGGTG CGGATCCCGG AGCAGTGCAG CTTCGGGTTC GGCGATGTGC CGGGGGTCGA CCTGCAGCTG ATGGATGACC TGGAGCGGTG CAACTTCCGC GATCTGCCCG AGGGTACGGT GTTCGCCCGG GCGGCGCCGG AGTCCCGGGC GTTCTTCACG GTAGAGGACA ACGATGGCCG CGAGGCGGCG GCGGAGTTCT TTCAGCGCGA TGGCGATACG ATCCGCCTGC GCCGTCCGGC CATGCCGGCC ATGCTCGCCT GCAATACGGC GGCCATCCGT CAGGATGTGC TCTGCTACCT GATGGAGCCG GTCCACCTGA CCGGACGGGC CGGCGGTTGA
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Protein sequence | MLKTYQGLPK GLLGAAAPEL EDRLGGPSLI EVPGRREPPL FVTVLLHGNE TTGWEAVQRV LTEFQGRTPP RSLLLFIGNV RAARHGVRRL PEQPDYNRVW PGTSLPDSPE QHLAAEVVAR VRSRGCFASI DVHNNTGMNP HYGCVNRLEG PYLQLAALFS RTVVYFTRPQ GVQSLALARL APAITVECGQ PGSPGAAEHA AELISSALHL SRLPEGVPGG ISVYHTVAAV RIPEQCSFGF GDVPGVDLQL MDDLERCNFR DLPEGTVFAR AAPESRAFFT VEDNDGREAA AEFFQRDGDT IRLRRPAMPA MLACNTAAIR QDVLCYLMEP VHLTGRAGG
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