Gene Hhal_1015 details

Gene Information

• Locus tag: Hhal_1015
• Symbol: lipB
• ID: 4709593
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1086848
• End bp: 1087501
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639855486
• Product: lipoate-protein ligase B
• Protein accession: YP_001002593
• Protein GI: 121997806
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0321] Lipoate-protein ligase B
• TIGRFAM ID: [TIGR00214] lipoate-protein ligase B

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCTGCG CACTCGAGCA CATCCATACC CGCTACCTGG GCGAACAGCC GTATGAGCCG 
ACCTGGACGG CCATGCGCAC CTTCACCGAG GAGCGTAGCA GCGAGACCCG GGACGAACTC 
TGGCTACTGC AGCATCCCCC GGTCTACACG CTGGGCCAGG CGGGACGCCC GGAGCACATC 
CTGGATACCG GCGAGACGCC CGTGGTTCAC ACCGATCGGG GTGGGCAGGT CACCTGGCAC 
GGCCCGGGGC AGCTGGTCGC CTATCCGCTG CTCGACCTGC GGCGGTGGGG CCTGGGGGTG 
CGGACGCTGG TCCACGCTCT GGAGCAGTCG GTGGTCTCGC TGCTGGCCGC CTACGGGGTG 
CCGTCGCACC GACGCGAGGA CGCCCCCGGG GTCTACGTGG ACGGCGCCAA GGTAGCAGCC 
CTGGGGATTC GGGTGCGCCG GGGCTGCAGC TATCACGGCC TGTCGCTGAA TGTCTGTAAC 
GACCCGGCCC CCTTCGAGCG CATCCATCCC TGCGGCTACG CCGGTCTGAC GACCACGCGG 
GTGCACGATC TGGGCATCAC CACGCCGCTG GATCGCCTGG AAGTAGAGCT GGGGATCTAC 
CTGCTGCAGG CCATCGACGC CGCGTCCCGC GCATCACGGC ACGACCGAGC CTGA 

 

Protein sequence

MPCALEHIHT RYLGEQPYEP TWTAMRTFTE ERSSETRDEL WLLQHPPVYT LGQAGRPEHI 
LDTGETPVVH TDRGGQVTWH GPGQLVAYPL LDLRRWGLGV RTLVHALEQS VVSLLAAYGV 
PSHRREDAPG VYVDGAKVAA LGIRVRRGCS YHGLSLNVCN DPAPFERIHP CGYAGLTTTR 
VHDLGITTPL DRLEVELGIY LLQAIDAASR ASRHDRA