Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1008 |
Symbol | |
ID | 4709584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1079349 |
End bp | 1081271 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639855479 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_001002586 |
Protein GI | 121997799 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCTTT CCATCCGTGA TCAGCAACAG GATGCCTCCA GGATCCAGCG ACGGATCGTG GTCGCCGGTG TGCTCTGCAT CCTGGTGGTC GCCGGGCTGA TGACCCAGAT GGTGCGCCTG CAGGTGGTCG ATCACCACCA CTACGCCACC CTCTCCCAGG AGAACCGCAT CAAGGTCAAC GCCATACCAC CGAGCCGTGG CCAGATCCTG GACCGCAACG GCGCCATCCT CGCCGAGAAC CGCCCCTCGT ACCAGCTAGT GGCCACGCCG GAACGCATCC CGGATATCGA GACCATGCTC GATGAGGTCA GCGACATCAT CGAGCTCACC GACGCCCAGC GCAAGCGTTT CCTCAACCGC CTGAGCAACT CGCGTCACTT CGAGGCCCTG CCGCTGCGCA CCCGGCTCGA CGAGGAAGAG GTCGCCAAGC TCGCCGTCCA CCGCCACCGC TTCCCCGGCC TGGAGGTGGA CGCCCGGCTG GTGCGCCACT ACCCGGAAGG CCACACCGGC AGCCATGCGG TGGGCTACGT AGGGCGCATC ACCGCCCGGG ACCTGCGCCG CATCGACCGC TCGGCCTATC GCGGCACCAA CCACATCGGT AAGAGCGGCG TCGAACACGC CTATGAGCAG GTCCTCCACG GCGAGGTGGG CGTCGAACGC GTCGAGACCA ACGCCGCCGG GCGGGTGCTA CGCACCCTCG ACCGCCACCC GCCGCGCTCC GGTGACGATC TGATCCTGAC CCTGGACATC GACCTGCAGG CTGCCGCCGA GCGCGCCCTC GGCGATCAGC GCGGGGCGGT GGTGGCCATG GATCCGGACA ACGGCGACAT CCTGGCCCTG GCCAGTCGCC CGCACTACGA CCCCAACAAG TTCGTCCGGG GCATGACCTC CGAGCGCTTC CAGGAGCTGG AAGACACCGG CTGGCAGCCG CTGATCAACC GGCCGATCCG CGGGCTCTAT CCACCGGCCT CCACCATCAA GCCGTTCGTC GGCCTGGCCG CCCTGGAGCA CGACGTCATC CGCCCAGACA CCGAGGTCCA CTGCGACGGC ACCTACCATG TGGAGGGTCG CGACGAGCCC TTCCGCTGCT GGCGCGACTG GGGCCATGGC GACACCGACT TCGTCCAGGC CGTGGCCGAG TCTTGCAATG TCTTCTTCTA CGACACCGCC TTCCGCCTCG GCATTGACCG CATGTCGGCG TTCCTGGAAC CGTTCGGTTT CGGCACCCCG ACTCAGGTAG ACACCTCGGG CGAGCGCAGC GGCATCCTCC CCGATCGCGA CTGGAAGCGC CGCGCCCTGG GCGGCGGCTG GTTCCACGGA GAGACGGTGA TCACCGGTAT CGGCCTGGGC TACTTCAGCA CCACGCCGCT GCAGCTGGCT CGGGCCACCT CGATCCTCGC CAACCAGGGA CGCATCGTGG AACCGCGCCT GGTGCAGGCG GTCCGCGACG GCGAGCAGGG GCACGAATCA CGAACCGCCG CCACTACCCC GCAGGAGCGC ATCGAGTTGA GCAACCCGGA GCACTGGGAG CTCACCACCG AGGCCATGCG CGCCGCCGTC GAGCACCCGC GCGGCACCGC CCGGCTGATC GGCGACGACC TCGAGTACAG CCTGGCCGGC AAGACCGGTA CGGCGCAGGT CACCGAGAGC CACGAGGACG ACGACGCGGA CGTCCCCGAG CACCTGCGCA GTCACGCCCT GTTCATCGGG TTTGCCCCGG CGGAGACCCC GGAGATCGCC GTCGTGGTGG TGGTCGAGAA CGCCGAAGGC GGCGGTGGTG CTGCAGCCGC CCCGGTGGCG CGGGCCGTCA CCGACGCCTG GCTGATGGAT GATTACACCT TCCTCGAGGA CCTGGAGGCC GGCCGCATCG ACGAGAGCGA GGTCGAGGAC GAGGAGGATG CGCCCATGGA GCTGATGCCA TGA
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Protein sequence | MSLSIRDQQQ DASRIQRRIV VAGVLCILVV AGLMTQMVRL QVVDHHHYAT LSQENRIKVN AIPPSRGQIL DRNGAILAEN RPSYQLVATP ERIPDIETML DEVSDIIELT DAQRKRFLNR LSNSRHFEAL PLRTRLDEEE VAKLAVHRHR FPGLEVDARL VRHYPEGHTG SHAVGYVGRI TARDLRRIDR SAYRGTNHIG KSGVEHAYEQ VLHGEVGVER VETNAAGRVL RTLDRHPPRS GDDLILTLDI DLQAAAERAL GDQRGAVVAM DPDNGDILAL ASRPHYDPNK FVRGMTSERF QELEDTGWQP LINRPIRGLY PPASTIKPFV GLAALEHDVI RPDTEVHCDG TYHVEGRDEP FRCWRDWGHG DTDFVQAVAE SCNVFFYDTA FRLGIDRMSA FLEPFGFGTP TQVDTSGERS GILPDRDWKR RALGGGWFHG ETVITGIGLG YFSTTPLQLA RATSILANQG RIVEPRLVQA VRDGEQGHES RTAATTPQER IELSNPEHWE LTTEAMRAAV EHPRGTARLI GDDLEYSLAG KTGTAQVTES HEDDDADVPE HLRSHALFIG FAPAETPEIA VVVVVENAEG GGGAAAAPVA RAVTDAWLMD DYTFLEDLEA GRIDESEVED EEDAPMELMP
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