Gene Hhal_1007 details

Gene Information

• Locus tag: Hhal_1007
• ID: 4709583
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1078824
• End bp: 1079315
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639855478
• Product: rod shape-determining protein MreD
• Protein accession: YP_001002585
• Protein GI: 121997798
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACCGGGC ATCGGCCACG CAACGGCGGC GGGATCATCC TGCTCAGCTT CATCATCGCC 
CTGATGCTGA CCATCGTCCC CATGCCGGGC TGGGCGCAGG AGTTCCGCCC GGAGTGGACG 
GCGCTGATCC TGCTCTACTG GGGCCTGGCA CTGCCCGAGC GGGTGGGCGT GGGCGTCGGG 
TGGCTGGTGG GGCTGTTCCA GGACGCCCTG CTCGGGACCC TGCTCGGGCA GCACGCCCTG 
GCCTTCGCCC TGATCGCCTT CCTGGCCCTG CGGCTGCACC AGCATCTGCG CCTGGTGCCG 
GTCTGGCAGC AGGCGGTGGT GGTACTCGGG CTACTGGTGG TCGCCCAGCT GGTCGTCTTC 
TGGATCAACG GCATCATCGG GCGGCCGGCT CCGGAGTGGC AGGCGTGGGC CGCGATCCTG 
GTCGGCGCTG CCATCTGGCC GTTGGTCTTT CACATCATGA GGGGGGTGCG GCGCCGCTTC 
CAGGTGCAGT GA 

 

Protein sequence

MTGHRPRNGG GIILLSFIIA LMLTIVPMPG WAQEFRPEWT ALILLYWGLA LPERVGVGVG 
WLVGLFQDAL LGTLLGQHAL AFALIAFLAL RLHQHLRLVP VWQQAVVVLG LLVVAQLVVF 
WINGIIGRPA PEWQAWAAIL VGAAIWPLVF HIMRGVRRRF QVQ