| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1002 |
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| Symbol | gatB |
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| ID | 4709576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1073418 |
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| End bp | 1074857 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855473 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001002580 |
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| Protein GI | 121997793 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTGGG AAACCGTCAT CGGTCTCGAG ATCCACGCGC AGCTCGCGAC CCGCACCAAG
ATCTTCTCCG GCGCGCCGAC CGCCTACGGC GCCGAGCCGA ACACCCAGGC CTGCCCGGTG
GACCTCGGCC TACCCGGGGT CCTGCCCGTG CTCAACCGCG AAGTGGTGCG CATGGCCATC
AAGTTCGGCC TGGCCGTCGA CGCGCGGATC GCGCCGCGCT CGGTCTTCGC GCGCAAGAAC
TACTTCTACC CCGACCTGCC CAAGGGGTAT CAGATCTCGC AGTACGACCT GCCCATCGTC
GAGGGCGGGC ACCTGGACAT TGAGCTCGAG GACGGCGCCA GCAAGCGGAT CGGCATCACC
CGCGCCCACC TCGAGGAGGA TGCCGGCAAG TCCCTGCACG AAGACTTCCA CGGCATGACC
GGGGTCGATC TCAACCGTGC CGGTACGCCG CTGATGGAGA TCGTCTCGGA ACCGGATCTG
CGCTCGCCGG CCGAGGCCGC CGCCTACATG AAGAAGCTCC ACGCCCTGGT GCGCTATCTG
GAGATCTGCG ACGGCAACAT GCAGGAGGGG TCCTTCCGCT GCGACGCCAA CGTCTCGGTG
CGCCCCGTCG GGCAGGAGGC GTTCGGCACC CGGGCCGAGC TCAAGAACCT CAACTCCTTT
CGCTTCGTCG AGCGGGCCCT CGAGTACGAG GTCGAGCGGC AGATCGACCT GCTCGAATCC
GGCGGCGAGG TGGTGCAGGA GACCCGCCTC TACGACGTCG ACAAGGGCGT CACCCGCTCC
ATGCGGACCA AGGAAGAGGC CAACGACTAC CGTTACTTCC CGGAGCCGGA CCTGCTCCCC
GTGGAGGTGG ATGCGGCGCT GGTCGACGAG GTGCGGGAGA CCCTGCCCGA ACTGCCCGAC
GAGAAACGCC GGCGGTTCGA GGAGGAGTAC GGCCTGCCGG CCTACGACGC CGGTGTGCTG
ACGGCCACCC GGGACATGGC CGATTTCTTC GAGCACGCCG TCAGCGAGTC CGGCGGCTTC
GCCAAGCGCA CCGCCAACCT GCTGATGAGC GAGCTGCTGG CCTACCTGAA CAAGGACGGC
CTGGAGATCG CCGAATCACC GGTCACCCCG GAGATGCTGG GCAAGCTGGT GGCCCGGGTC
GAGGACGAAA CCCTCTCGAG CCGCGGTGCC AAGGATGTCT TCGAGGCCAT GTGGGCGGGC
GAAGGCGAGC CGGACGAAGT CATCGAGAAG AAGGGACTCA AGCAGGTCAC CGACACCTCG
GCCATCGAGG CGCTGGTCGA CGAGGCCATC GCCAACAACC CGCAGCAGCT CGAGCAGTAC
CGCGCCGGCA AGGAGAAGCT CTTCGGCTTC TTTGTCGGTC AGGTGATGAA GGCCTCCGGC
GGCAAGGCGA ACCCGCAGCA GGTCAACGAG CTGCTCAAGA AGAAGCTGGA CGGATCGTGA
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| Protein sequence | MKWETVIGLE IHAQLATRTK IFSGAPTAYG AEPNTQACPV DLGLPGVLPV LNREVVRMAI
KFGLAVDARI APRSVFARKN YFYPDLPKGY QISQYDLPIV EGGHLDIELE DGASKRIGIT
RAHLEEDAGK SLHEDFHGMT GVDLNRAGTP LMEIVSEPDL RSPAEAAAYM KKLHALVRYL
EICDGNMQEG SFRCDANVSV RPVGQEAFGT RAELKNLNSF RFVERALEYE VERQIDLLES
GGEVVQETRL YDVDKGVTRS MRTKEEANDY RYFPEPDLLP VEVDAALVDE VRETLPELPD
EKRRRFEEEY GLPAYDAGVL TATRDMADFF EHAVSESGGF AKRTANLLMS ELLAYLNKDG
LEIAESPVTP EMLGKLVARV EDETLSSRGA KDVFEAMWAG EGEPDEVIEK KGLKQVTDTS
AIEALVDEAI ANNPQQLEQY RAGKEKLFGF FVGQVMKASG GKANPQQVNE LLKKKLDGS
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