Gene Hhal_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1001 
Symbol 
ID4709575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1072531 
End bp1073421 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content72% 
IMG OID639855472 
ProductHsp33 protein 
Protein accessionYP_001002579 
Protein GI121997792 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACG CCAGTCAACG GTTTCTCTTT GAAAACGCCG ACGTACGCGG CGAGATTGTA 
CAGCTGGAGC AGGCGTTCGC CGCCGTCCGC GAGCACCACG ACTACCCGCC GGCGGTGGCC
CGCCTGCTCG GCGAGGCCAT GGCCGCGGCG GCGGTGATGT GCGCCACCAT CCGCTCCGAC
GGCGTGCTCA GCCTCCAGGT GGAGGGGGGC GAGGAGGCCG CCGTGCCGAT GCTGCTGGTC
CAGGTGGACG CCTCCGAGGG CACCCTGCGC GGTACCGCCC GTTACCAGGG CGAGCCCACC
CGGGGCGGGC TCGCTGAGCT GTGTGCCGGC GGTCGCCTGG CCATCACCAT CGAGCCGGAG
GAGGGGCAGC GCTACCAGGG GGTGGTCGGG CTCGACGACG CCGGGCTGGC CGCCACGCTG
GAGGGGTACT TCCGCGACTC CGAGCAGCTG CCCACCCGCC TGCACCTGGC CTGCGACGGC
CAGCGGGCCG GCGCGCTGTT GCTTCAGCGG CTGCCGGCCA GCGGCGGCAC CCAGCCCACC
GAGGCCGACC CCGACGCCTG GGACCGCATC GGTTACCTGG CGGAGACGCT GACCGACCGC
GAGCTCCTGG AGCGCCCGGT CAACGAGGTC CTGCACCGGC TTTTCCATCA GGAGACCGTG
CGGGTCTTCG AGCCGCGGGC GCTCGCCTTC CGCTGTCGTT GTTCGGCAGG GCGGATCGCC
TCCATCCTCC GTAGCCTCGG CCGCGAGGAA GTGGAGCAGG TCCTCGCTGA GGAGGGGGTG
GTCGAGGTGC GCTGCCAGTT CTGCGGGGCT ACCTACAGCT ACGACCGGGT CGACGTGGCG
CAGGCGCTCA GCGACGGGAA CGCCGCCCCG GGCAGTGATA GCTACCACTG A
 
Protein sequence
MSDASQRFLF ENADVRGEIV QLEQAFAAVR EHHDYPPAVA RLLGEAMAAA AVMCATIRSD 
GVLSLQVEGG EEAAVPMLLV QVDASEGTLR GTARYQGEPT RGGLAELCAG GRLAITIEPE
EGQRYQGVVG LDDAGLAATL EGYFRDSEQL PTRLHLACDG QRAGALLLQR LPASGGTQPT
EADPDAWDRI GYLAETLTDR ELLERPVNEV LHRLFHQETV RVFEPRALAF RCRCSAGRIA
SILRSLGREE VEQVLAEEGV VEVRCQFCGA TYSYDRVDVA QALSDGNAAP GSDSYH