Gene Hhal_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0999 
Symbol 
ID4709573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1070939 
End bp1071784 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content73% 
IMG OID639855470 
ProductHemK family modification methylase 
Protein accessionYP_001002577 
Protein GI121997790 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAGG CAGGCCAGAG CATCGGCACA GCGCTGCACG AGGGCACCGA GGCGCTGCGG 
GCCGCGAGCG CAACGGCCCG ACTGGATGCT GAACTGCTGC TCGCCGAGGT GCTCGGCGTG
GGCCGCAGCC ACCTGTTCGC CTTCCCGGAG CGGCCGATCC CGGCGGCGAC CATCGAGGCC
TATCGCGCCC TGATCGCCCG CCGGCGAACC GGTGAGCCGG TGGCCTACCT GATGCGGCGC
TGCGAGTTTC GCGATCTGAC CCTGAGCGTA ACCCCCGCGG TCCTCGTCCC CCGCCCCGAA
ACCGAGCACT TGGTCGAGCA GGCGGTGGCC TGCCTGCCCG CCGGCGGCCA GGTGCTGGAG
CTGGGCACCG GCAGCGGCGC CATCGCCCTG GCGGTGGCCC ATGAGCGCCC CGATGCGCGG
ATCACCGCCA CCGAACGCAG CACCGCGGCG CTGGCAGTGG CGCAGGAAAA CCGACACCGC
CTGGGGCTCT CCGAGGTGCA CCTGACCCCG GGCGACTGGA ACGAGGGCAT CCCCCCGGGC
CCCTTTGACG TCATCGTCAG CAACCCACCC TACGTGCAGA CCACCGCCGC CGAGTGGGGG
AACGGCGCCC TGGAACACGA ACCACGGGAG GCACTGGCCG CCGGCCACGA CGGTCTTGCC
GACATCCGCA GCCTCGTACC GCCGGCCACC GCCGAACTGG CCCGGGGCGG CTGGCTGATC
CTCGAACACG GCGCCCGACA GGGCGGGGCG GTGCGCGAAC TGCTCCAGGC TGCCGGGCTG
GAAGCGGTAC GCACCGAGTG CGACCTGGCC GGACTGGAGC GGCTCACCCT GGGGAGGCGG
CCATGA
 
Protein sequence
MSEAGQSIGT ALHEGTEALR AASATARLDA ELLLAEVLGV GRSHLFAFPE RPIPAATIEA 
YRALIARRRT GEPVAYLMRR CEFRDLTLSV TPAVLVPRPE TEHLVEQAVA CLPAGGQVLE
LGTGSGAIAL AVAHERPDAR ITATERSTAA LAVAQENRHR LGLSEVHLTP GDWNEGIPPG
PFDVIVSNPP YVQTTAAEWG NGALEHEPRE ALAAGHDGLA DIRSLVPPAT AELARGGWLI
LEHGARQGGA VRELLQAAGL EAVRTECDLA GLERLTLGRR P