| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0990 |
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| Symbol | ipk |
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| ID | 4709377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1062255 |
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| End bp | 1063121 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639855461 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001002568 |
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| Protein GI | 121997781 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.276134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT GGAGCGTCTG GCCGGCCCCG GCCAAGATCA ACCTCTTTCT CCACGTCCTC
GGCCGGCGTG CCGACGGCTA CCACGAGCTG CAGACCGCCT TCCAGCTGCT CGGCTACGGG
GATCGCATCT GGCTGCGCCC GCGTGTCGAC GGACGGGTGG AGCGCTGCAG CCATCTGCCC
GGCGTGGCCG CGGAGGACGA CCTCACCGTT CGCGCAGCGC GGGCGCTTCA GGCGGCCACC
GGCAGCGCGG GCGGGGTCGA TATCCACGTG GACAAGCGCC TGCCGGCCGG CGGGGGAGTC
GGTGGCGGTT CCTCGGACGC CGCCACCGTG CTGGTCGCCC TGAACCATCT GTGGCAGACG
GGGCTGGATG AGGAGGCGCT GGCCGGCATC GGTCTGGCCC TGGGGGCCGA CGTCCCGGTG
TTCGTGCGCG GGCGCAGCGC CTGGGGCGAG GGGGTGGGCG AGCAGCTGCG CCCCATGCCG
GTGGACCCGG CGGGTAGCCG CTGGTATCTG GTGGTCGACC CGGGGGCGAG TATCTCCACC
GCCGAAGTCT TTGGCGCGCC GGAATTGACA CGGGATACGT CTCCGATCAC AATACCCGAC
CTTCGCGCCG GCGCCGTTCG CAACGACTGT GAGCCGGTGG TTCGGAGCCG CTGGCCGGCA
GTCGCCGAGG CGCTCGAGTG GCTCGGCCGG CACGGTCAGG CGCGAATGAG TGGTACCGGC
AGCTGCTGTT TCGTCGGCTT CCCCGGTGAG GCCGAGGCGC AAGCTGCCCT GGAGCGTCTA
CCCGGAGCGT GGTCCGGGTT CGTCGCTCAG GCCGTGGAAC GGTCTCCGCT GCACCTTACG
CTCGCGGAGG CCGCCCGTAC CGGCTGA
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| Protein sequence | MTEWSVWPAP AKINLFLHVL GRRADGYHEL QTAFQLLGYG DRIWLRPRVD GRVERCSHLP
GVAAEDDLTV RAARALQAAT GSAGGVDIHV DKRLPAGGGV GGGSSDAATV LVALNHLWQT
GLDEEALAGI GLALGADVPV FVRGRSAWGE GVGEQLRPMP VDPAGSRWYL VVDPGASIST
AEVFGAPELT RDTSPITIPD LRAGAVRNDC EPVVRSRWPA VAEALEWLGR HGQARMSGTG
SCCFVGFPGE AEAQAALERL PGAWSGFVAQ AVERSPLHLT LAEAARTG
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