| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0980 |
|---|
| Symbol | |
|---|
| ID | 4709524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1052747 |
|---|
| End bp | 1053652 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639855449 |
|---|
| Product | VacJ family lipoprotein |
|---|
| Protein accession | YP_001002558 |
|---|
| Protein GI | 121997771 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2853] Surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGGA GCGTGCTGCA CTGGACCCTG CTGCTGGCCC TGTTCCCGCT GCTCGGCGCC
TGCGCCACCA CCGACAACCC CAACGACGAC GGCGCCGAGG ATGAGTGGGC CGCCGAGGAC
GACGGCTGGA ATGAGTACGA CGACTGGGAC CAGGGCACCT GGGACCCCCT GGAGGGCTAC
AACCGCCGGG TACACGCCTT CAACGATGCC GCCGACCGCT ACGTGCTCCG CCCCGTGGCC
GTGGCCTATC GGGACAACGT GCCGCGCGGG GTGCGCCGCC CGCTCGGCAA CTTCGTCGAC
AATCTGCGGG AGCCCTTCCA CGCCGGCAAC TACTTCCTGC AGGGCCGCGG TAGCGACGGC
ACGCGCAGCA TCACCCGATT TGCCATCAAC TCGACCATCG GCGTGCTCGG CCTGTTCGAC
GTCGCCGGCG CCGCCGGCCT GGAGTCCAAG CGCACCGACC TGGGCCTGAC CCTGGGTCAC
TGGGGCGCCC CCGAGGGCCC CTACCTGGTC CTGCCCCTGC TCGGCCCGAG CAACGCCCGA
GACAGCAGCG GCCTGACTGT GCAGTACTTC AGCCGCCATT ACCATAGCCC GACTCACTGG
ACCGACATCC CCTCTCCCGA GCGCTACGCC GCCCCGATCC TGGCGGGGAT CGACACCCGC
GTCGACCTGC TCGCCCTCGA CGAGCTCATG GCCGAAACCG GCACCGACCC CTATATCTTC
ATGCGCGAGT CGTACCTGCA GAACCGGCGC GAGCGCCTGG GCGAGGACGA CTGGGATGAG
TGGGACGACT GGGACGACGA TGAGGAGTGG GACAACGGCG ATTGGGACGA GGACGACGAG
TGGGAGAATG ACAACGGATG GGAAAACGGC GACTGGGACG AGGGTGAAGA GGACGACGAC
AACTGA
|
|---|
| Protein sequence | MRRSVLHWTL LLALFPLLGA CATTDNPNDD GAEDEWAAED DGWNEYDDWD QGTWDPLEGY
NRRVHAFNDA ADRYVLRPVA VAYRDNVPRG VRRPLGNFVD NLREPFHAGN YFLQGRGSDG
TRSITRFAIN STIGVLGLFD VAGAAGLESK RTDLGLTLGH WGAPEGPYLV LPLLGPSNAR
DSSGLTVQYF SRHYHSPTHW TDIPSPERYA APILAGIDTR VDLLALDELM AETGTDPYIF
MRESYLQNRR ERLGEDDWDE WDDWDDDEEW DNGDWDEDDE WENDNGWENG DWDEGEEDDD
N
|
|---|
| |