Gene Hhal_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0975 
Symbol 
ID4709515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1047726 
End bp1048607 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content71% 
IMG OID639855444 
Producthypothetical protein 
Protein accessionYP_001002553 
Protein GI121997766 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.538355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCCACA GCATGACCGC CTTTGAACGA CGCGAGGCCC CGGGTGACTG GGGCGGCCGC 
ACCGGCCGCC TGACCTGGGA GCTGCGCTCG GTCAATCACC GCTACCTGGA GGTCCACCCC
CGGTTACCCG AGGAGCTGCG CGCCATCGAG CCGGGGGTAC GCGAGCGGGC CCGTCAACGG
CTCGGCCGCG GCAAGCTGGA GTGCACGCTG CGCTTCACCC TGGAGGAGGG CGGCCAGACC
GGGCTGAGCG TGGACTGGCA GCGGGTCGAG GAGCTGGCGC AGATCACCGC GGAGATCGGC
GCGCGCTTCG GCGACGCGGC CCGGCCGGCG TCCACGGCGG AGATCCTGCG CTTCCCCGGC
GTACTCGGCG AGGCCGCGGT GGACCTCGGA CCGGTGCGCG ATGCCGCGCT CGCCCTGTTC
GACGATGCCC TGGAGGGGCT GCGCGATACC CGGCAGCGCG AGGGCGAGCA GCTGGCCGCA
CACCTACGTG CCCGGGCTGA GGAGGCCCGG GACATCGTCG GGCAGCTCGG CGAGCAGCGC
ACCACGATCA ACGAGCGCAT CCGCCAGCGG CTCACCGCGC GCCTGGATGA GCTTGCGGAG
CCCGCCGACC CCGGACGCCT GGAACAGGAG CTGGCCTACA TCGCCCAGCG CCAGGATATC
GACGAGGAGC TGGAGCGCCT CGGCACCCAT CTCCAGGAGG TGCTGCGCCT GCTGGAGGCC
ACCGAACCGG TCGGCCGACG CCTCGACTTC CTCATGCAGG AACTCAACCG GGAGGCCAAT
ACCGTCGCCT CGAAGTCGGG CCACGTGGCC ACCAGCAACG CCGCCCTCGA CCTCAAGGTC
CTGATCGAAC AGATGCGCGA ACAGGTGCAG AATGTCGAGT GA
 
Protein sequence
MIHSMTAFER REAPGDWGGR TGRLTWELRS VNHRYLEVHP RLPEELRAIE PGVRERARQR 
LGRGKLECTL RFTLEEGGQT GLSVDWQRVE ELAQITAEIG ARFGDAARPA STAEILRFPG
VLGEAAVDLG PVRDAALALF DDALEGLRDT RQREGEQLAA HLRARAEEAR DIVGQLGEQR
TTINERIRQR LTARLDELAE PADPGRLEQE LAYIAQRQDI DEELERLGTH LQEVLRLLEA
TEPVGRRLDF LMQELNREAN TVASKSGHVA TSNAALDLKV LIEQMREQVQ NVE