| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0969 |
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| Symbol | |
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| ID | 4709488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1040683 |
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| End bp | 1042872 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639855438 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001002547 |
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| Protein GI | 121997760 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.406599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCG CCGCGAGTGT CATCAACGCC GGTGAATCGG CGTCGGCTTC CGACCCGGAG
CGGCGCGTTC AGGAGGTTTG TGCGCTACTC GAGCGCTACC TCGAGCCCCA CCAGATCGAG
CAGGTCTACG ACGCCTACCG TTTCAGCGCC GCCGCCCACG AGGGGCAGCG GCGCCGCTCC
GGCGAGCCCT ACATCACCCA CCCGATCGCC GTGGCCCGCA TCCTCGCCGA GATGCGCCTG
GATGCCGAGG CCGTTGTAGC CGCGCTGCTC CACGACGTCA TCGAGGATAC GCCCACCGCC
AAGGAGCGGA TCGCCGAGCG CTTCGGCGAG CAGGTGGCCG AGCTGGTGGA CGGAGTCTCC
AAGCTCGGCG CCATCGACTT CCAGAGCAAG GAAGAGGCCC AGGCGGAGAG CTTCCGCAAG
ATGATCCTGG CCATGGCCAA GGACATCCGC GTCATCCTCA TCAAGCTCGC CGACCGCCTC
CACAACATGC GCACGATCTG GATCATGCGT CCGGAGAAGC GCCGCCGCAT CGCCCGCGAG
ACCCTCGACA TCTACGCCCC CATCGCCCAG CGGCTGGGCA TCAACAGCCT GCGCACCGAG
CTCGAGGACC TGGGCTTTGC CGCGCACTAC CCGCTGCGCT ACCGGGCGCT CAAGGAGAAG
CTCGCCCGCC AGCGGGGGCG GCGCGGGGTG ATCCTCGACA CCGTCTGCGA CCAGGTGCGC
ACCCGCCTGG AGCAGGCTGG GATCCAGGCC GAGGTGGTCG GGCGTGAGAA GCATCTGTGG
TCCATCTACT GCAAGATGGC CCAGAAACAG CTCAACTTCC GCGACGTCTT CGACGTCTAC
GGCTTCCGGG TGGTGGTGGA CACGGTGGAC GAGTGCTACC GCGTCCTCGG CATCCTGCAC
GGGCTCTACA AGCCGCGCCC GGGGCGCATC AAGGACTACA TCGCCATCCC CAAGGCCAAC
GGCTACCAGT CGCTGCACAC CACGCTGGTC GGGCCGCATC GCATCCGCCT CGAGGCGCAG
ATCCGCACCC GGGATATGCA CGCCGTGGCC GAGTCGGGCA TCGCCGCCCA CTGGTTCTAT
AAGGATGCCG GCGAGAGCGG TAACACGGCC CAGGTCCGTG CCCGGCAGTG GGTCAAGGAC
CTGCTTGAGA TGCAGCGCAG TGTCGGCACG TCCGAGGAGT TCATCGAGAG CGTCAAGATC
GACCTGGTCC CCGACGAGAT CTACGTCTTC ACCCCCAAGG GCGACATCCT CGAGCTGCCG
AGCAATGCCA CCCCGGTGGA TCTGGCCTAC GCCATCCACT CTGACGTGGG TAACTCCTGC
ATCGCCGCCA AGGTCGACCA CCGCCTCACG CCACTGCGTA CGCCGCTGCA GAGCGGGCAG
ATGGTCGAGA TCATCACCGC CCCGGTGGGG CGGCCCAATC CGGTCTGGCT GGATTTCGTG
GTGACCGCCA AGGCGCGCAC CGCCATCCGT CACGCCCTCA AGCGGCTGCG CGACGACGAG
GCCATCGAGC TCGGCCGGCG CATGGTCGAG CGCGCCCTCT CGGCGTTGTC GGTGGATCTC
GACGCCCTCG ACCCGGCGCG CGTCGACGAG GCCCTGGCCG GCACGGGCCT CGCCAGTCTC
GACGACCTGT TCCGCGATGT CGGTCTGGGC AACCGGGTGC CGTGGCTGGT GGCGCAGCAG
CTCAGTGGTC TCGAGCAGGG CGAGGCCGAG CTGGAAGAGC GCCCCGAGGA GCCCGAGCCC
CACGGGACCC TGACCATCCG CGGCAACGAG GGCACGGTGG TCTCCTTCGC GCGCTGCTGC
CGGCCGATCC CCGGCGACCC GATCGTCGGC TTCGTCAGCA CCGGTCGTGG CGTGGTCATC
CACCACCGTG ATTGCAAGAA CGTGGCCAGT CAGCGCAAGC GTTCCGAGAG CTGGGTGGAC
GTGGACTGGG AGGCCGACGT CGATGCCGAG TTCCCCACCC TGATCGGCAT CGACGTGGTC
AACGAGCGTG GCGCCCTGGC TCAGCTCGCC CACGGGATCT CGGCGCAAGG GGCGAGCATC
GAGAACGTGA CCATCGAGGA GCGCGACGGC ATGATCGCCA CCGTCCGCTT CCTGATCCTG
GTTCGTGACC GCCGCCACCT GGCGGCCGTG GTGCGCCATC TGCGGGCGAT GCCCCCGGTG
CAGCGCATCG TGCGCAAGAA AGACGGCTAA
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| Protein sequence | MARAASVINA GESASASDPE RRVQEVCALL ERYLEPHQIE QVYDAYRFSA AAHEGQRRRS
GEPYITHPIA VARILAEMRL DAEAVVAALL HDVIEDTPTA KERIAERFGE QVAELVDGVS
KLGAIDFQSK EEAQAESFRK MILAMAKDIR VILIKLADRL HNMRTIWIMR PEKRRRIARE
TLDIYAPIAQ RLGINSLRTE LEDLGFAAHY PLRYRALKEK LARQRGRRGV ILDTVCDQVR
TRLEQAGIQA EVVGREKHLW SIYCKMAQKQ LNFRDVFDVY GFRVVVDTVD ECYRVLGILH
GLYKPRPGRI KDYIAIPKAN GYQSLHTTLV GPHRIRLEAQ IRTRDMHAVA ESGIAAHWFY
KDAGESGNTA QVRARQWVKD LLEMQRSVGT SEEFIESVKI DLVPDEIYVF TPKGDILELP
SNATPVDLAY AIHSDVGNSC IAAKVDHRLT PLRTPLQSGQ MVEIITAPVG RPNPVWLDFV
VTAKARTAIR HALKRLRDDE AIELGRRMVE RALSALSVDL DALDPARVDE ALAGTGLASL
DDLFRDVGLG NRVPWLVAQQ LSGLEQGEAE LEERPEEPEP HGTLTIRGNE GTVVSFARCC
RPIPGDPIVG FVSTGRGVVI HHRDCKNVAS QRKRSESWVD VDWEADVDAE FPTLIGIDVV
NERGALAQLA HGISAQGASI ENVTIEERDG MIATVRFLIL VRDRRHLAAV VRHLRAMPPV
QRIVRKKDG
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