| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0968 |
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| Symbol | |
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| ID | 4709483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1040275 |
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| End bp | 1040667 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639855437 |
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| Product | putative endoribonuclease L-PSP |
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| Protein accession | YP_001002546 |
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| Protein GI | 121997759 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.18464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCGAG AAATCATCCA CACCGACGCC GCCCCGGCCG CCATTGGTCC CTACAGCCAG
GCGGTGCGCG CCGGCGACTT CGTCTACATC TCCGGGCAGA TCCCGCTGGA CCCGCAGACC
GGCGAGCTGG TGGGTGCCGA CATGAACAGC CAGGTGGCCC GGGTCTTCGA CAACCTCGGT
GCCGTGGCCG AGGCCGCCGG CGGCAGCCTG GCCGACGCCG TGCGCATCGC CATCTACCTC
ACCGACCTGA GCCACTTCGC GCTGGTCAAC GAGGTCATGA CGCAGTACCT CTCCGAGCCC
TACCCCTCGC GGGCAGCCAT CGGCGTCGCC GCGTTGCCCA AGGGGGCCGC GGTGGAGATG
GACGCCGTCC TCTATCTGCC CCGGGAGGGC TGA
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| Protein sequence | MSREIIHTDA APAAIGPYSQ AVRAGDFVYI SGQIPLDPQT GELVGADMNS QVARVFDNLG
AVAEAAGGSL ADAVRIAIYL TDLSHFALVN EVMTQYLSEP YPSRAAIGVA ALPKGAAVEM
DAVLYLPREG
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