Gene Hhal_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0963 
Symbol 
ID4709464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1034916 
End bp1035896 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content71% 
IMG OID639855432 
Productbiotin synthase 
Protein accessionYP_001002541 
Protein GI121997754 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.032686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAGA CCGACACCTG GCACTGGGAT CAGCCGCAGA TCCACGCCTT GTTCGAGCTG 
CCCCTGCCGG AGCTGCTGTT CCGCGCCCAG GAAGTGCATC GCCGTCACTT TAACCCGGGG
CAGGTCCAGG CCTGCACCCT GGTCTCGATC AAGACCGGCG CCTGCGCCGA GGACTGCACC
TACTGCTCCC AGAGCGCGCG GTACGACACC GGCCTGGAGC GCGAGGCGCT GATCGATGTC
GAGACCGTCC GCGAGGCGGC CCAGCGGGCT CGGGCCAGCG GGGCCACCCG GCTGTGCATG
GGTGCGGCCT GGCGCGGCCC CAAAGACCGC GACCTGGAGA CGCTGGTAGC CATGGTCCGG
GCGGTTAAGG CCGAAGGCCT GGAGGCCTGC CTCTCTGCCG GCCTGCTCGC CGAGGGGCAG
GCCGAGCGGC TGGCCGAGGC CGGGCTCGAC TACTTCAACC ACAACCTCGA CACCTCGCCG
TCGTACTACG ACCAGGTGGT GACCACCCGC AGCTACGAGC AGCGGCTGCA GACGCTTGAG
CGCATCCGCG ACGCCGGGAT GCGGGTCTGC TGCGGTGGCA TCGTCGGCCT GGGGGAGGCG
CGGGCGGACC GCGTCGAGAT GCTCGCCACC CTGGCCAACC TGCCGGTGCC GCCGCAGAGC
GTGCCGATCA ACCGGCTGAT CCCCATCCCC GGGACCCCGC TGGAGGCGGC CGAGCCGGTG
GATCCGTTCG AGATCGTGCG CACCATCGCC GCCACGCGCC TGGTCCTGCC GCGCTCCTAC
GTCCGCCTGG CGGCCGGTCG CGAGCAGATG AGCGACGAGC TCCAGGCGCT GTGCCTGAGC
GCCGGTGCCA ACAGTCTGTT CCTCGGCGAG CGGCTGCTGA CCACCGACAA CCCGGACGCC
GACGCCGACC ATCGGCTGCT CCACCGCCTG GGCATGACCC TGGAGCCGCG CACCCACAGC
TGCGCCGAGC TGGAGCCGTG A
 
Protein sequence
MTETDTWHWD QPQIHALFEL PLPELLFRAQ EVHRRHFNPG QVQACTLVSI KTGACAEDCT 
YCSQSARYDT GLEREALIDV ETVREAAQRA RASGATRLCM GAAWRGPKDR DLETLVAMVR
AVKAEGLEAC LSAGLLAEGQ AERLAEAGLD YFNHNLDTSP SYYDQVVTTR SYEQRLQTLE
RIRDAGMRVC CGGIVGLGEA RADRVEMLAT LANLPVPPQS VPINRLIPIP GTPLEAAEPV
DPFEIVRTIA ATRLVLPRSY VRLAAGREQM SDELQALCLS AGANSLFLGE RLLTTDNPDA
DADHRLLHRL GMTLEPRTHS CAELEP