Gene Hhal_0951 details

Gene Information

• Locus tag: Hhal_0951
• ID: 4709399
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1026485
• End bp: 1027171
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639855420
• Product: spermine synthase
• Protein accession: YP_001002529
• Protein GI: 121997742
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0421] Spermidine synthase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.18222
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCCCG AGTACGTGCG CTACAACCAG ACCGTCGTCG AGCGGCGCCG CTCCGCTTAC 
CAGGAGATCG TGATCGCCCA CGATCCGGCG GTGGGGCACC TGCTCTACCT CGACGACGAC 
CTCCAGATCG CGAACGCCGA CGACCCCTAC AACCAGGCGA TCACCCGTCC CCTGCGCGAG 
TCGAATGCGC TGGGCGATGT GCTCATCCTC GGCGGTGGCG ACGGCGGGGT GTTGCGCGCC 
CTGCTCGACG CCGGGGCACG CCGGGCGGTG CTGGTGGATA TCGACGGCGA GGTCATCGAG 
CTGTCGCGGC AGTATCTGCC GGATCTCTGC GGCGACGCCT TCGACCGCCC CGGCGCCGAG 
GTGGTGGTCG GCGACGCCTT CGCCTACCTC GACGCCGAGG AGCGCTGGGA CGGCATCATC 
TACGACCTGA CCATGGACCC GGTCCGCGAG GACCAGCCGC GCACTGAGTA CATCCGCGAG 
ATCCTCGCCA AGGTCTCGGC CCGGCTGCGC CCCGGCGGGG TGCTGGGCAT GCAGTGCTGT 
GGCGCCGACG AACCCGGCCT GCGCGAGGAG ATCCGTGCGG GCCTGGCGCA CACCTTCGTT 
GATTGGGGTG ACTGGGAGGA CGAGGTGCCG TCCTTCGATG TGCCCTGGGT CTTTGCCTGG 
GCGCGCATCC CGCGGGAGGA ATCGTGA 

 

Protein sequence

MQPEYVRYNQ TVVERRRSAY QEIVIAHDPA VGHLLYLDDD LQIANADDPY NQAITRPLRE 
SNALGDVLIL GGGDGGVLRA LLDAGARRAV LVDIDGEVIE LSRQYLPDLC GDAFDRPGAE 
VVVGDAFAYL DAEERWDGII YDLTMDPVRE DQPRTEYIRE ILAKVSARLR PGGVLGMQCC 
GADEPGLREE IRAGLAHTFV DWGDWEDEVP SFDVPWVFAW ARIPREES