Gene Hhal_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0948 
Symbol 
ID4709334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1024276 
End bp1024581 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content73% 
IMG OID639855417 
Producthypothetical protein 
Protein accessionYP_001002526 
Protein GI121997739 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.366521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTGGA TCACCCCGGA CCCGGAACAA GACGCCTGGC TGGTGCACGT CCGCGTCACC 
CCTCGGGCCA AACGCGAGTC GCTGGACGTC GAGGGCGAGC GGTTGCGCGT GCGCCTCAAC
ACCCCACCGG TGGACGGCAA GGCCAACACC GCCCTGCGCA AGCTGCTGGC CCGGCAGTTC
GGTGTCGCCA AGTCGGCGGT GTCGCTGCTG CGTGGCGAGC GCAGCCGCGA CAAGACGGTG
CGCATCACCG CGCCCAAGCA GTGGCCGGCC GGGCTGCCGC ACCCGGGGGA GCCGCCGGCA
CCCTGA
 
Protein sequence
MPWITPDPEQ DAWLVHVRVT PRAKRESLDV EGERLRVRLN TPPVDGKANT ALRKLLARQF 
GVAKSAVSLL RGERSRDKTV RITAPKQWPA GLPHPGEPPA P