Gene Hhal_0947 details

Gene Information

• Locus tag: Hhal_0947
• ID: 4709333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1023609
• End bp: 1024187
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639855416
• Product: protein of unknown function YGGT
• Protein accession: YP_001002525
• Protein GI: 121997738

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.618723
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATCCA ACCACTTCGC CGACGCCCTG ATCTTCCTGA TCGCCACCGC CTTCTCACTC 
TACATCCTGG CGGTGATGCT GCGTTTCCTG CTGCAGACGG CGCGGGCCGA CTTCTTCAAC 
CCGATCTCGC AGTTCCTGGT GCGCGCCACC TCGCCGGTGC TCAACCCCCT GCGCCGGATC 
ATCCCCGGGG TGGGCGGCAT CGACCTGGCG GCCATCGTCC TGATGTTCGT CCTGCAACTG 
GCGGCGCTGT ACATCATCTT CCTGCTCGCC TACGGGCAGC AGCCGCCACT CGGGCCGCTG 
GCCATCGAGA CCGTGGGCCG GTTGCTGGGC CTGCTCCTGA ACCTCTACAC GATCCTCATC 
CTCATCGGCG TGATCGTCAG CTGGGTCAAC CCCACCGCCA GCCACCCGGG GCTGCATCTG 
CTTCACCAGC TGGTCAGCCC GATCCTGCGG CCGATTCGCT CCTTCCTGCC GGACATGGGC 
GGGCTGGACC TGTCGCCGCT GATCGCCCTG GTGCTGATCC ACGTGGTGCG GATGCTCACC 
GTCTATCCGC TGCGGGGCCA GGTGCCGCTG CCGATGTAG 

 

Protein sequence

MESNHFADAL IFLIATAFSL YILAVMLRFL LQTARADFFN PISQFLVRAT SPVLNPLRRI 
IPGVGGIDLA AIVLMFVLQL AALYIIFLLA YGQQPPLGPL AIETVGRLLG LLLNLYTILI 
LIGVIVSWVN PTASHPGLHL LHQLVSPILR PIRSFLPDMG GLDLSPLIAL VLIHVVRMLT 
VYPLRGQVPL PM