Gene Hhal_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0940 
Symbol 
ID4709306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1017453 
End bp1017965 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content71% 
IMG OID639855409 
Productphosphoribosyltransferase 
Protein accessionYP_001002518 
Protein GI121997731 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.330547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACG CCGAGATCGA CGTCCCGGAA CTCCTCGACA CCACGGCCGC GGACATCAAC 
ACCGAACTGG AGCGCCGCGG TATCCGCTCG CCGATCCTCG TCGGCGTGCA CACGGGCGGG
GTCTGGGTGG CCCGCGGCCT CCACGACCGC CTCGGGGCGC GACCGCCGGT GGGCACCCTG
GAGGTCGCCT TCCACCGCGA CGACTACGCG ACCTCGGGGC TCAAGGCGGC GGTCCAGACC
TCCGAAGTCC CAGTCACCCT GGACGGACGC GCTGTGCTGC TGGTCGACGA CGTCATCCAC
ACCGGCCGCA CCACCCGGGC GGCCCTCAAC GCCCTGTTCG ACTACGGCCG GCCGCGGCGG
GTGTTATTGG CCGTCCTGGT CGACCGTGGC GGGCGCGAGC TACCCATCCA GCCGGATGTG
ATCGGCACGC GACTCGATCT GCCCGCCGAG CAGCGACTCA AGCTGCGCGG CCCGGAGCCG
CTGCGCTTCA TGCTGGAAGG AGAGACGCCG TGA
 
Protein sequence
MTDAEIDVPE LLDTTAADIN TELERRGIRS PILVGVHTGG VWVARGLHDR LGARPPVGTL 
EVAFHRDDYA TSGLKAAVQT SEVPVTLDGR AVLLVDDVIH TGRTTRAALN ALFDYGRPRR
VLLAVLVDRG GRELPIQPDV IGTRLDLPAE QRLKLRGPEP LRFMLEGETP