Gene Hhal_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0938 
Symbol 
ID4709308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp1016457 
End bp1017035 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content70% 
IMG OID639855407 
Producthypothetical protein 
Protein accessionYP_001002516 
Protein GI121997729 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.147168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGC AAACCGGACA AGGTGGAGAC CAGCTGGGCA GTCAGTTCCT GATCGCCATG 
CCAGCCCTGG ACGACCCGAA CTTCGCGCAG ACCGTCACCC TGCTCTGCGA GCACACCGAA 
GACGGGGCCA TGGGCATCGT CGTCAACCGA CCCACCGAGG TCACCCTCGG CGATCTGTTC 
CGCCATCTGG AGCTGGAGAT CACCGACGGT TGCCCGGAGG ATCAGGTCGT CTTCGCCGGC 
GGTCCGGTGC AGCGCGAGCG CGGCTTTGTC CTCCACCCCG AGGGCGAGCA GTGGAACGCC 
ACCACCCCCG TCTGCGAGGG CGTGGCCCTG ACCACCTCGC GGGACATCCT CGCCGCCCTG 
GCGCGGGGCG AGGGCCCCGA GCGCTTCCTG GTGGCGCTGG GTTACGCCGG CTGGGGGGCC 
GGGCAGCTGG AAGAGGAGCT GGCGCAGAAC GCCTGGCTCT CCGGCCCCGC CGAGGCCCGG 
GTCATCTTCG ATACCGACAC CAACCAGCGC TGGCGCGCGG CGGCAGCGCA ACTGGGTGTG 
GACATCGCGC TGCTCTCCTC GGAAAGCGGC CATGCCTGA
 
Protein sequence
MSEQTGQGGD QLGSQFLIAM PALDDPNFAQ TVTLLCEHTE DGAMGIVVNR PTEVTLGDLF 
RHLELEITDG CPEDQVVFAG GPVQRERGFV LHPEGEQWNA TTPVCEGVAL TTSRDILAAL 
ARGEGPERFL VALGYAGWGA GQLEEELAQN AWLSGPAEAR VIFDTDTNQR WRAAAAQLGV 
DIALLSSESG HA