Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0937 |
Symbol | |
ID | 4709307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1015539 |
End bp | 1016405 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639855406 |
Product | TonB family protein |
Protein accession | YP_001002515 |
Protein GI | 121997728 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.164985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGAGA CCCCCGCCGT GAACGAGGCT ACCGTGCGAC CGGACGACCG TCTGGGCATG GCGCTGTTCC TTGCCGTGGT GGTCCACGCC CTGCTGATCC TGGGGGTGGG CCTGACCTGG GAGGGCGAGG AGCGCCCGTC GGAGACCTCC ATGATGGAGG TCACCCTGGC CTACGACGAG GCCGAAACCC CGCCGGAGGA GGCCGACTAC CTCGCCGACC TGGATCAGGA CGGCGGCGGG GTGGCCGAGC AGGCGCAGAT CCCCTCGCCG CTGGCCGGTG AACCGACCCC GGCCACCGAG GCCCCCGAAC CGGGCGAGCC CGCGGCCACC CCCGAGGCGC GGGCCGAGGC ACTGATCGAG AGCGAACAGG CCGAGACACC CACCCCGCCC ACCGACGACG AGACCCAGGC CGAGGAGCGG CCGTCGCTCC AGGACCTGCT CGACAGCCGG CGCGAGGCGG CGGCAGCCGA GGCGGTGGCA CTGCAGCAGC GACTGAGCCA GCCGCGGGAA CCGTCGAAAC GTTTCCTCAA CGCCCGCACC CGCTCCCACG AGGCCGCCGC CTACATGGAG GCGTGGACGC GCAAGGTCGA AGCGGTGGGC AATCTCAACT ACCCAAGCGA GGCGCGGGAG CGCGGCCTGT CGGGACGGCT GATCCTCGAG GTGACGCTGA TGCCCGACGG TTCTCTCGAG GACGTGCGCA TCGTCCAACG CTCCCGCCAC CGCCTGCTTG ACGAGGCGGC GGTGCGCATC GTGCGACTCG GCGCCCCGTA TCCGGATATA CCGGAGGAGG TCCTCGAGGG GCAGGATCGC CTGGTGATCA CCCGGACCTG GGAGTTCGTC GAGGGGCGGC GCGTACGCGC CCAATAA
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Protein sequence | MSETPAVNEA TVRPDDRLGM ALFLAVVVHA LLILGVGLTW EGEERPSETS MMEVTLAYDE AETPPEEADY LADLDQDGGG VAEQAQIPSP LAGEPTPATE APEPGEPAAT PEARAEALIE SEQAETPTPP TDDETQAEER PSLQDLLDSR REAAAAEAVA LQQRLSQPRE PSKRFLNART RSHEAAAYME AWTRKVEAVG NLNYPSEARE RGLSGRLILE VTLMPDGSLE DVRIVQRSRH RLLDEAAVRI VRLGAPYPDI PEEVLEGQDR LVITRTWEFV EGRRVRAQ
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