Gene Hhal_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0930 
Symbol 
ID4710361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1007210 
End bp1008226 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content78% 
IMG OID639855399 
Producthypothetical protein 
Protein accessionYP_001002508 
Protein GI121997721 
COG category[S] Function unknown 
COG ID[COG5351] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0087813 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCCTG TCTCGGTCCA GGGGCCGCTG GATGCGCGGG CCTGGGTGGA CCTCGATGCC 
GCTGGGTGCC CGGGGATCGC GGTGGCGGTC AAGGCCGGCT TCCGCGGCGG CGATGCCGCC
CGGCTGCGCC TCGATGACGA CACGCCGGCG CTGGAGACCG CCGAACGCTA CGCCGGTGAT
CCCGCCGCTC ACGCCCCGCT CACCGCACCC GACTGCGTTC CCTTCAAGCA CGGGGCCGAG
TGCCTGCTCC ACGGCGCGGT ACAGGTCGGC CCCGGGCGGT CGCAGGCAGC GGCCTGTCTG
GGGGTCGAGG ACGCCGGCGG CCGGCCCCGG TTCGGCCCCA AGCGGGTGTG GGCGGTGGCC
GAGCCGCCGC CGCGGGCCTC CGATCCGCCC GGTGCGCTGG AGGGGCCGGT GCCGCTCACC
TACGAACTGG CCTACGGCGG ACCACTCGGT GGGCCGCGGC ACCGGCGTTA CGCTCGCAAC
CCGGTGGGCC GGGGGCATCG GGCGGCGTGG TGGGGTGCCG CCGCCGGGCC GTCGCCCCGG
CTGCTGTGGG ACGACCACCG CGCCACCCGG CGCGGGGCGC CCGCCGGCTT CGGGCCTCTG
GCGGCGGCCT GGGCGCCCCG GGCCCGGCGT TTCGGGCGCC TGGATGCCCA TGCCTATCGC
CAGGGCCAGC TGCGCTACCG CCGCCTGCCC CGGCCCGACG CCTGGAATGC CGCCCCGGCA
GACCAGTGCC TCGACACCCC GTTGTGCGGC GACGAGCGCA TCCGCCTGCA GGGGGTCCTC
CCTGGGGTGG ACCCGGACCA CACGGTCATC TGGCAACTGC CCGGCGGCGG TCCGCAGGTC
ACCCTGCACC GCCCGGGGCG CGGACAGCGG GTGACGGTGC AGGCGGACAC CCTGGGGATC
GACGCCGACG CCGGCCGGGT GTGGCTGGTC TGGCGGGGGT GGGTGCCGGA GCCGGCGCCG
GGGCCGGGCT GGGCATTGCG GGTCGATGCC GACGGGATCG GGGGCGGAGA GCGATGA
 
Protein sequence
MLPVSVQGPL DARAWVDLDA AGCPGIAVAV KAGFRGGDAA RLRLDDDTPA LETAERYAGD 
PAAHAPLTAP DCVPFKHGAE CLLHGAVQVG PGRSQAAACL GVEDAGGRPR FGPKRVWAVA
EPPPRASDPP GALEGPVPLT YELAYGGPLG GPRHRRYARN PVGRGHRAAW WGAAAGPSPR
LLWDDHRATR RGAPAGFGPL AAAWAPRARR FGRLDAHAYR QGQLRYRRLP RPDAWNAAPA
DQCLDTPLCG DERIRLQGVL PGVDPDHTVI WQLPGGGPQV TLHRPGRGQR VTVQADTLGI
DADAGRVWLV WRGWVPEPAP GPGWALRVDA DGIGGGER