Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0923 |
Symbol | |
ID | 4710398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 996893 |
End bp | 997510 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639855392 |
Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
Protein accession | YP_001002501 |
Protein GI | 121997714 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG CGGTGTTTGG TGGGACCCGC GGCGTCGGGG CCGAGGTGGT GCGCCAGGCC CTGGGGCGCG GATGGCGGTG CCGGGTGCTG GCGCGCAGCG CCGATCGGGT GCCGGAGCTG CCCGGGGTCG AGGTGGTGGT CGGCGACGTG CTCGATCCCG AGGCCGTGGG CCGGGCCCTC TACGACTGCG ATGGCGCGGT CATCGCCCTG GGGCAGACCC GTCGCAACCC GCCGCGGTTG TGCAGTGAGG GCACCCGGGT GATCGTCGAG GCCATGCAGC AGCAGGGCGT CCCGCGGGTG GTGGCGGTCT CGGCCATGGG GGTGGGGGAC AGCTACGCCC AGGTGTCGGT GGTCTTCCGG CTGCTGATCC GCACCCTGAT GAAGGGTCTG ATGACGGATA AGGAGCGCCT CGAGCAGGTC CTGGCTGCCA GCGATCGCGA CTGGGTGGTG GTGCGCCCCG GGCGGCTGAC CAACCGACCG GGGCGGGGCG AGTGGCGCGC CGGCACGGAT CACGACACCG GCGCCGGGTC GGTCAGCCGG GCCGATGTGG CGACGTTCCT GCTCGAGCAG CTGGGCGACG ACCGTTACCT GCGTCAGGCG CCGTACATCA CCGGGTGA
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Protein sequence | MKIAVFGGTR GVGAEVVRQA LGRGWRCRVL ARSADRVPEL PGVEVVVGDV LDPEAVGRAL YDCDGAVIAL GQTRRNPPRL CSEGTRVIVE AMQQQGVPRV VAVSAMGVGD SYAQVSVVFR LLIRTLMKGL MTDKERLEQV LAASDRDWVV VRPGRLTNRP GRGEWRAGTD HDTGAGSVSR ADVATFLLEQ LGDDRYLRQA PYITG
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