| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0920 |
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| Symbol | |
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| ID | 4709992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 994376 |
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| End bp | 995152 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639855389 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001002498 |
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| Protein GI | 121997711 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTGA ACTGGATCCC GGCAGGGGGC GAGGTCCTGA TCCAGGGGGC GAGCCGCGGC
ATCGGGCTGA ACGGGGTCGA GCAGTGCCTG GCGCAGCCGC ACATCGGCCG GGTCTGGGCG
TCGTGTCGAA ACCCCGACCA GGCGGAGGCG CTGCAGGCGC TGGCGGGCGC CCACCCGGAC
CGGCTGCGGC TGCTGACCCT GGACGTCACC GACGAGGCCA CCGTGCGCGC TGCGGCGGCG
GAGGTCCAGG CCGCCGAGGG GCGGCTGCAC CTGGTGGTGA ATGCTGCCGG GCTGTTGCAC
GACCGAGCGC GGCGGATCCG TCCGGAAAAG CGCCTGGAGG ATGTCTCGCC GGAGGCCCTG
GCGGCGCTGT TCCAGGTCAA CGCCGCTGGC CCGCTGCTGG TGGCGCGCCA CTTCCTGCCA
CGGCTCGAGC ACGGCGATCC GGCGGTCTTC GCGGCGATCT CAGCACGGGT GGGGTCGATT
GGCGACAATC GCAAGGGAGG GTGGTACGCC TACCGGGGGT CGAAGGCGGC GCTGAATCAG
TTGATCCGCA CCCTGGCCGT GGAGCTGCGC CGACGGGCGC CGGCGGTGAC GTGCGTATCG
CTGCACCCGG GGACCACGGA TACGGACCTC TCGGCGCCGT TCCAGGCCTG GGTGCCGGCG
GAGCAGTTGT TTGCGCCGGA GCGGACGGTG CGCCAGCTGC TGGCGGTGAT CGACGACCTT
GCCCCGGAGG ACAGCGGGGG CTTCTTCGCC TGGGATGGGC AGCCGATCCC CTGGTGA
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| Protein sequence | MALNWIPAGG EVLIQGASRG IGLNGVEQCL AQPHIGRVWA SCRNPDQAEA LQALAGAHPD
RLRLLTLDVT DEATVRAAAA EVQAAEGRLH LVVNAAGLLH DRARRIRPEK RLEDVSPEAL
AALFQVNAAG PLLVARHFLP RLEHGDPAVF AAISARVGSI GDNRKGGWYA YRGSKAALNQ
LIRTLAVELR RRAPAVTCVS LHPGTTDTDL SAPFQAWVPA EQLFAPERTV RQLLAVIDDL
APEDSGGFFA WDGQPIPW
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