Gene Hhal_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0916 
Symbol 
ID4710309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp990113 
End bp991000 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content70% 
IMG OID639855385 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_001002494 
Protein GI121997707 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCCA GTACTCCCGT TGCCCAGACG CACATCCAGA GCCTGCCGCT GCTGCACAGC 
GGCAAGGTCC GTGATATCTA CGCCGTCGAT GATGAGCGAC TGCTGATCGT GGCCACCGAT
CGGCTCTCCG CCTTCGACGT GATCCTGCCG GACCCGATCC CCGACAAGGG GGCGGTGCTC
ACGCGGGTCT CGAACTTCTG GTTCCGCAAG ACCGCCCACC TGGCCGCCAA CCACCTCCTC
GACACCCCGC CGGAGTCGGT GGTGGCACCG GAGGAGGCCG ATCAGGTGCG CGACCGGGGT
GTGGTGGTCC GCCGCCTGCA GGCCCTGCCG GTGGAGGCCA TCGTGCGTGG CTACCTGGCC
GGTTCCGGGT GGCAGTCGTA CCAGCGCGAC GGTACCGTCT CCGGGGTGGC GCTGCCCGAC
GGCCTGCGCC AGTCGGATCG ACTGCCCGAG CCGATCTTCA CGCCGACCAC GAAGGCCGCG
GTCGGCGACC ACGACGAGCC GATCTCCTTC GCGCAGACCG TCGAACGCAT CGGCGCCGAC
CTGGCCGAGC GGATCCGCAC CATCGCCCTG GAGGTCTTCG CCCTGGCCAC CGAGTATGCG
GAGTCCCGCG GCCTGATCAT CGCCGACACC AAGCTGGAGT TCGGTGTCAC GCCCGAGGGC
GAGCCGGTGA TCATCGATGA GCTGCTGACC CCGGACTCGT CCCGCTTCTG GCCGGCCGAC
GCCTGGCAGC CCGGTGCCAC GCCGCCGGCG TTCGACAAGC AGTACATCCG CGACCACCTG
GAGGCGCTGG GCTGGGACAA GCGCCCGCCG GCGCCCCACC TGACCGACGA CGTGATCCGC
CAGACCGCTG AGAAGTACCG CGAGGCCGAG CGGCTGCTGA CGCGCTAG
 
Protein sequence
MTASTPVAQT HIQSLPLLHS GKVRDIYAVD DERLLIVATD RLSAFDVILP DPIPDKGAVL 
TRVSNFWFRK TAHLAANHLL DTPPESVVAP EEADQVRDRG VVVRRLQALP VEAIVRGYLA
GSGWQSYQRD GTVSGVALPD GLRQSDRLPE PIFTPTTKAA VGDHDEPISF AQTVERIGAD
LAERIRTIAL EVFALATEYA ESRGLIIADT KLEFGVTPEG EPVIIDELLT PDSSRFWPAD
AWQPGATPPA FDKQYIRDHL EALGWDKRPP APHLTDDVIR QTAEKYREAE RLLTR