| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0915 |
|---|
| Symbol | |
|---|
| ID | 4710308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 988669 |
|---|
| End bp | 990102 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639855384 |
|---|
| Product | deoxyribodipyrimidine photo-lyase |
|---|
| Protein accession | YP_001002493 |
|---|
| Protein GI | 121997706 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCAACG CCCTCGTCTG GCTGCGCCGG GACCTGCGCC TGGCCGATCA GCCGGCCCTG
GCCCGCGCCG CACAAACCGC GGAGCGCCTG GCCCCGGTCT ACATCCACGC CCCCGCAGAG
ACCCGACCGA CCGTAGGCGC CGCCAGTTGC TGGTGGTTGC ACCACAGCCT GGCGGCACTG
GACGCCGAGC TGGCCTCGGC CGGCAGTCGA CTCTGCCTGG ACACCGGCCC CAGCGCCGAG
CGCCTATGCC ACTGGGCGCA GGTCAGCGAC GCCGCGGTGG TCTACTGCAC CGCCATCGCC
GAGCCGTGGG CGCGGCAACA GGAGGCCGCC GTGGCCGAGG CCCTGGCCGC GATCGGCGTC
CGCCTGGAGG TCCTCGCCGA CGGCCTGCTC ACCGATCCTA GCGCCGTACG CAACCGCAGC
GGCACCCCGT ACCGCGCCTT CACGCCCTTC TGGCGCAGCG TGCGGGCGCA GCTGGATCCG
CCCCGCCCCG CGCCGCCGCC GGCGTTGCCT GGCCTGCCGG AGGCCATCCC GGAGCCGCAG
CCGCTGGAGA CGCTGGGGCT GCTGCCGCGC ATCCGCTGGG ACGAGAAGCT GGCCCCCTGC
TGGCAGCCCG GCGCCGCCGG GGCCCAGCAG CGCCTGGAGC GGTTCCTGGA TGGGGCGGGG
CCGGCCTACG GCGAACGGCG CGACTTCCCG GCGCAACCGG GGACCTCACG GCTGTCGCCC
CACCTGCACT TCGGCGAGAT CAGCATCCGC GCCGTCTGGC ACGCGGTGCG CGACGCCCAG
CAGATGCAGC CGGCGGCGGC TGACGCCCTG GACACCTTCC TCGCCGAGCT GGGCTGGCGG
GAGTTCGCCT ACCACCTGCT GTGGCAGCAG CCGGAACTCC ACCGCACGCC CATCGACGAG
CGCTTCAGCC GCTTCCCCTG GCGCGAGGAC CCCGACGGCG CCCTGCTCGA CGCCTGGCGC
CGCGGCGCCA CCGGCATCCC GCTGGTGGAT GCGGGCATGC GCGAGCTGTG GGCCACCGGC
TGGATGCATA ATCGGGTGCG CATGGTGGTC GGCTCGTTCC TGGTCAAGAA CCTGCGCCTG
CCCTGGCAGC ACGGTGAGGC GCACTTCCGC GATACTCTGG TGGACTGGGA CCTGGCCAGC
AACAGCATGG GCTGGCAGTG GGTGAGCGGC TGCGGGGCGG ACGCCGCCCC CTACTTCCGC
ATCTTCAACC CGGTGCGCCA GGGCGAGCGC TTCGACCCCG ACGGCGACTA CGTCCGCCAC
TGGGTCCCGG AGGTGGCCGG CCTGCCCAAG AGCCACATCC ACCAACCCTG GGCGGCGCCC
GCCGACGCGC GGGCCCGCTG CGGCTTGCAC CTGGGGCGGG ACTATCCGGA GCCCCTGGTC
GATCTGGCCA CCAGCCGCAA GGAGGCGCTG GCAGCATTCC ATGCCCTCGG TTAG
|
|---|
| Protein sequence | MTNALVWLRR DLRLADQPAL ARAAQTAERL APVYIHAPAE TRPTVGAASC WWLHHSLAAL
DAELASAGSR LCLDTGPSAE RLCHWAQVSD AAVVYCTAIA EPWARQQEAA VAEALAAIGV
RLEVLADGLL TDPSAVRNRS GTPYRAFTPF WRSVRAQLDP PRPAPPPALP GLPEAIPEPQ
PLETLGLLPR IRWDEKLAPC WQPGAAGAQQ RLERFLDGAG PAYGERRDFP AQPGTSRLSP
HLHFGEISIR AVWHAVRDAQ QMQPAAADAL DTFLAELGWR EFAYHLLWQQ PELHRTPIDE
RFSRFPWRED PDGALLDAWR RGATGIPLVD AGMRELWATG WMHNRVRMVV GSFLVKNLRL
PWQHGEAHFR DTLVDWDLAS NSMGWQWVSG CGADAAPYFR IFNPVRQGER FDPDGDYVRH
WVPEVAGLPK SHIHQPWAAP ADARARCGLH LGRDYPEPLV DLATSRKEAL AAFHALG
|
|---|
| |