| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0913 |
|---|
| Symbol | |
|---|
| ID | 4709877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 986551 |
|---|
| End bp | 987774 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639855382 |
|---|
| Product | cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_001002491 |
|---|
| Protein GI | 121997704 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA TCAGCGAGAC CGGATCTGCC CACACACAAG CCGGAGTCCC GCTGGCAGCG
CGGCCGCTGA TCCGCTGGCT GGCGCGCTTT CGCACCGGCA CCCTGCGGCT GCATCTGCCC
GATGGCCGCT CGCTGATGTT CGGCGGCGAG GTCGACGGCC CGGCCGCCGA GATGACCCTG
CACCGGCCGA CCCGGCTGGT GGGGCGGGTG CTGCACCGGG GCGACATCGG CTTCGCCGAG
AGCTTCATGG CCGGGGAGTG GGACACCCCG GCGCTGGCGC CGTTGATCCA GGTCATGGCC
AGCAACGAGC ACGCCTACAA CGCCACCCCC GCGGGGCGGT GGTACACCCG CGCCCTGCTC
GGGCTGCTCC ATCGGCTGCG CGCCAACACG CTGCGCGGCA GCCGGCGCAA CATCGCCTAC
CACTACGATC TGGGCAACGA CTTCTACCGG CTGTGGCTGG ACGAGACCAT GACCTACTCC
TCGGCGCTAT TCGCCGAGCC CGACCAGCCG CTGGCCGAGG CACAGCGCAA TAAGTATCTG
CGCACTCTCG AAGAGCTGGG CGCCCAGCCC GGCGACCGGG TTCTCGAGAT CGGCTGCGGC
TGGGGCGGCT TCGCCCGTGA GGCGGCCCAG GCCGGGGTGG CCGTGACCGG GCTGACCCTC
TCCCGCGAGC AGTTGGCCTG GGGGCAAGCG GCGCTGGCCG AGGCGGGGCT GGACGGCCAG
GCCACCCTGC GCCTCCAGGA CTACCGGGAG GTCTCCGGCG AGTTCGACCA CATCGTCTCC
ATCGAGATGT TCGAGGCCGT CGGCCAGGAG CATTGGCCGG CCTTCTTCAA GACCGTTCAC
CGCTGCCTGC GTCCCGGGGG GCGGGCCCTG CTGCAGATCA TCACCATCGA CGAGGCGGCC
TGGCCGGTCT ATACCGGCGG CCCGGACTTC ATCCAGCGCT ACATCTTCCC CGGCGGCATG
CTGCCCACCG AGGGCCACGT GCGCGACGGG CTGGCCGCCG CCGGCCTGCA CTGTGAGGCG
GTGACCAGCC ACGCCGAGGA GTACGCCGCC ACCCTGCTCG CCTGGCACGA GAACTTCCTG
GCCTGCCGCG AGCAGGTACG GGCCCAAGGC TTCGACGAGC GCTTCCAGCG CATGTGGCGC
TACTACCTGG GCTACTGTGA GGGTGGCTTC CGCTGCGGAC GCATCGATCT CCAGCGCTTC
CGGGTCCAGC GCCCGCATGG CTGA
|
|---|
| Protein sequence | MTQISETGSA HTQAGVPLAA RPLIRWLARF RTGTLRLHLP DGRSLMFGGE VDGPAAEMTL
HRPTRLVGRV LHRGDIGFAE SFMAGEWDTP ALAPLIQVMA SNEHAYNATP AGRWYTRALL
GLLHRLRANT LRGSRRNIAY HYDLGNDFYR LWLDETMTYS SALFAEPDQP LAEAQRNKYL
RTLEELGAQP GDRVLEIGCG WGGFAREAAQ AGVAVTGLTL SREQLAWGQA ALAEAGLDGQ
ATLRLQDYRE VSGEFDHIVS IEMFEAVGQE HWPAFFKTVH RCLRPGGRAL LQIITIDEAA
WPVYTGGPDF IQRYIFPGGM LPTEGHVRDG LAAAGLHCEA VTSHAEEYAA TLLAWHENFL
ACREQVRAQG FDERFQRMWR YYLGYCEGGF RCGRIDLQRF RVQRPHG
|
|---|
| |