Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0909 |
Symbol | |
ID | 4710864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 982873 |
End bp | 983418 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639855378 |
Product | appr-1-p processing domain-containing protein |
Protein accession | YP_001002487 |
Protein GI | 121997700 |
COG category | [R] General function prediction only |
COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0449366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCAC GGTTTGCGGA ACTCACCGTG GAGACCCGGG TGGGGGATAT CGCCGCCCAG GGCGACTGCG ATGCCGTGGT CAATGCCGCG AACGCCCAGC TGATGCCCGG CGGCGGCGTG GCCGGGGCGC TGCATCGCGC GGCCGGGCCG GAACTGGCCG AGGCGTGCCG GCCGCTGGCG CCCATTCAGC CGGGGCAGGC GGTGATCACC GCCGGCTTTG GCCTGCCCAA TCGGCACGTC ATCCACTGCC TCGGTCCGGT CTACGGCGTC GACGAACCCG GCGAGCAGCT GCTCGCCGCC TGCTACCGCA ACGCTCTGCA CCGGGCCGAG GAGCACGAGC TGACCCGGGT GGCGATGCCG GCGCTGTCCA CCGGCGCCTT CGGTTTTCCT ATGGAGCGCG CCGCCCGGGT GGCCATCGGC ACCCTGCAGC GGACGGCGGC GCAGCTCCGG TACGTCCGGC ATGTCCGCTT TGTCCTGGCC GACGCGGCGG CGCAGCAGAT CCACGATCAC GTGATTCAAG AACTGGCGGA GAACACAAGT GGCTAA
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Protein sequence | MQARFAELTV ETRVGDIAAQ GDCDAVVNAA NAQLMPGGGV AGALHRAAGP ELAEACRPLA PIQPGQAVIT AGFGLPNRHV IHCLGPVYGV DEPGEQLLAA CYRNALHRAE EHELTRVAMP ALSTGAFGFP MERAARVAIG TLQRTAAQLR YVRHVRFVLA DAAAQQIHDH VIQELAENTS G
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