| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0900 |
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| Symbol | |
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| ID | 4711419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 975648 |
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| End bp | 976763 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 639855369 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001002478 |
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| Protein GI | 121997691 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACGA CTGACCGGCA CCCGGACGAT CCCCGCTGGA TGGCCCGCGC CATTCGGCGG
GCGGCCGCGG TATGCCCGCC GCCGCACCCC AATCCGCGGG TCGGCTGCGT GCTGGTCCGC
GACGGCAGCG TGCTGGCCGA GGCCGCCCAC GAACAGGCTG GCGGGCCGCA CGCCGAGGCA
GCGGCCCTGC AGGCCGCCGG CGGCGCGGCC CATGGGGCCA CCGCCTACGT GACCCTGGAG
CCGTGCGCCC ACTACGGGCG CACGCCCCCT TGCGCCCGCG CCCTGATCGA CGCCGGCGTC
AGCCGGGTCG TGGTCGGGCA CCGCGACCCC AACCCCCGGG TGGCCGGGGG CGGTATCGCG
CAGCTCGAGG CCGCCGGGGT GGCGGTCACC GAGGGCGTGC TGGCCGCCGA TGCCGAGGCC
CTCAACCGCG GCTTCCTGCG CCGGATGGCC GGCGGGCGGC CGTGGGTGCG GGTCAAGCTG
GCGGCGAGCC TGGACGGGCG GACCGCCATG GCCTCCGGCG AGAGCCATTG GATCACCTCG
GCGGCGGCGC GCCGCGACGT CCACCGGGGG CGCGCAGAGG CCGCAGCGGT GCTCACCGGG
GTGGGGACCG TGCGCGCCGA CGACCCGCGC CTCGACGCCC GCGACGTCGA GCCGGCGGTG
CCGGCCGAGC GTCAGCCCCA GCGCGTGGTC CTCGACCCGC GCCTGACCAC GCCGCCACAC
GCGGCCCTGT TCCAGGCCCC GGGGCCGGTG CTCATCGGCC ACGCCGAGTA CGTCAACGAG
GCCCGGGCCC GGGCGCTGCG CAGCTGCGGG GCCGAGCTGT TGCCGCTCCC GCTGCAGGAG
GGCGGCCTCG ACCTGGCTGC CGTGCTCGAC GCCCTGGCGG CGCGCGAGAT CAACGAGGTC
TGGGTGGAGG CCGGCCCCAC GCTGGCTGGC TCCTGGGTGC GGGGCGGGTG GGCCGACGAG
CTGATCGTCT ACACCGCACC CCACCTGATG GGCGACGCCG CCCGGCCGTT GCTGGCCCTG
CCCGGCATCG AGACCATGGC GCAGCGCCAA CCGCTGGCGT TCAGCGATGT CCGGCGGGTG
GGTGAGGAAA TCCGCATCAC CGCGAGGTTG GTTTAA
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| Protein sequence | MTTTDRHPDD PRWMARAIRR AAAVCPPPHP NPRVGCVLVR DGSVLAEAAH EQAGGPHAEA
AALQAAGGAA HGATAYVTLE PCAHYGRTPP CARALIDAGV SRVVVGHRDP NPRVAGGGIA
QLEAAGVAVT EGVLAADAEA LNRGFLRRMA GGRPWVRVKL AASLDGRTAM ASGESHWITS
AAARRDVHRG RAEAAAVLTG VGTVRADDPR LDARDVEPAV PAERQPQRVV LDPRLTTPPH
AALFQAPGPV LIGHAEYVNE ARARALRSCG AELLPLPLQE GGLDLAAVLD ALAAREINEV
WVEAGPTLAG SWVRGGWADE LIVYTAPHLM GDAARPLLAL PGIETMAQRQ PLAFSDVRRV
GEEIRITARL V
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