Gene Hhal_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0897 
SymbolribH 
ID4709763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp973291 
End bp973761 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content70% 
IMG OID639855366 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001002475 
Protein GI121997688 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.498749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTAA CCGAAGGACA ACTCGTCGCG CTGCAGGATG CGCGATTCGC CCTTGTGGCG 
GCGCGCTTCA ACGATCTCAT CGTCGACCGG CTGATCGACG GCGCCGCCGA TACCCTGCGG 
CGCCACGGGG TGCCGGAGGA ACACCTGGAG CTGATCCGCG TGCCCGGTTC CTTTGAGCTG 
CCGCTGGCGG TCCAGCGCGT GGCCGACGCC GGCCGGGCCG ACGCCGTGAT CGCCCTCGGC 
GCGGTGATCC GCGGTGGTAC CGACCACCAC CAGTACGTGG CCGCCGAGTG CACCAAGGGC 
GTCGCCCAGG CGATGATGGG CTCCGGCGTG CCGGTCTCCT ACGGCGTGCT CACCGTCGAG 
ACTGTCGAGC AGGCCATCGA GCGTGCCGGG ACCAAGGCCG GCAACAAGGG CGCCGAGGCG 
GCGCTCTCGG CCCTGGAGAT GGTCGATCTG ATGCGGCAGC TCGAGGCGTA A
 
Protein sequence
MQVTEGQLVA LQDARFALVA ARFNDLIVDR LIDGAADTLR RHGVPEEHLE LIRVPGSFEL 
PLAVQRVADA GRADAVIALG AVIRGGTDHH QYVAAECTKG VAQAMMGSGV PVSYGVLTVE 
TVEQAIERAG TKAGNKGAEA ALSALEMVDL MRQLEA