Gene Hhal_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0896 
Symbol 
ID4709946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp972824 
End bp973291 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content69% 
IMG OID639855365 
ProductNusB antitermination factor 
Protein accessionYP_001002474 
Protein GI121997687 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.361769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCTT CAGGGGAAGG CAAGCGCCGC TCGCGGGCCC GATCCAAGCT CGTCCAGGCG 
CTCTATCAGT ACGCGGTCAC CGGCGCGTCG GCGGAGGATA TCGAGCGGCA GTTCCTCGCT 
GCCGGCCTCG GTGACATCGA CGTGGCCTAC TTCCGCGAGC TGATCTACGG GGTCACGGAT 
CGGGCGGCCG AGCTCGATGA ACAGCTCTCG GCGCTGCTCG ATCGTCCCCT GGTGCAGCTC 
GATCCGGTGG AGCGCTCGAT CCTGCGCCTG GGCGCCTTCG AGCTGTCCGA GCGCCTGGAG 
GTGCCCTACC GCGTCGTCAT CGACGAATCG GTGGAGTTGG CGCGGCGCTT CGGCGCTGAC 
CAGTCGCACC GCTACATCAA CGGCGTGCTC GACCGCTTCG GTGCCACCGT GGCGCTGCGC 
GCCGCCGAGC GCGGCGAGCG AAAGTCCAGG CGGGGGGATC GGCAGTGA
 
Protein sequence
MAASGEGKRR SRARSKLVQA LYQYAVTGAS AEDIERQFLA AGLGDIDVAY FRELIYGVTD 
RAAELDEQLS ALLDRPLVQL DPVERSILRL GAFELSERLE VPYRVVIDES VELARRFGAD 
QSHRYINGVL DRFGATVALR AAERGERKSR RGDRQ