| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0885 |
|---|
| Symbol | |
|---|
| ID | 4710137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 963529 |
|---|
| End bp | 964074 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639855354 |
|---|
| Product | dinucleoside polyphosphate hydrolase |
|---|
| Protein accession | YP_001002463 |
|---|
| Protein GI | 121997676 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.776975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGATT CAGACGGCTT TCGGCCCAAT GTCGGCATCA TCGTCGCCAA CGACGACGGG
CGGGTGCTGT GGGCTCGGCG GGCCGGAGAA GACGCCTGGC AGTTTCCCCA GGGCGGGGTC
GAGGCCAACG AGACCCCGCT GGAGGCGCTC TACCGCGAGC TGCGCGAGGA AGTGGGCCTC
GGGCCCGCCG ACGTGGCCGT CCTCGGCGCC ACGCGCCGCT GGCTGCGTTA CCGCCTGCCC
CGCCGCATGA TCCGTCGCCG AGGCAGCCGG TGCATCGGCC AGAAGCAGAT CTGGTTCCTG
CTGCGCCTGC TCGCCGACGA GCAGCGGGTG CGCGTCGACC GGGTGGCGCG CCCCGAGTTT
GACCGCTGGC GGTGGGTCGA CTACTGGTAT CCGGTCGAAG AGGTCATCTT TTTCAAGCGC
CAGGTGTACC GCCAGGCGCT GCAGGAACTC TCCGGCTATC TGCAGGCCGA TGACTGGGCC
GGCACCGGCA CCGAGGGTGG CCCCGCTGCG GTCATCCCGC CGGCGGCTCG GCGCCGATTG
CGATAG
|
|---|
| Protein sequence | MVDSDGFRPN VGIIVANDDG RVLWARRAGE DAWQFPQGGV EANETPLEAL YRELREEVGL
GPADVAVLGA TRRWLRYRLP RRMIRRRGSR CIGQKQIWFL LRLLADEQRV RVDRVARPEF
DRWRWVDYWY PVEEVIFFKR QVYRQALQEL SGYLQADDWA GTGTEGGPAA VIPPAARRRL
R
|
|---|
| |