Gene Hhal_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0878 
SymbolanmK 
ID4709110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp957062 
End bp958186 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content75% 
IMG OID639855347 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001002456 
Protein GI121997669 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.168415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGCAG GGGATGGCGA CGCGGCGTAT GTCGGGCTGA TGTCCGGTAC CAGTGTCGAC 
GGCATTGACG CCGCCCTGCT GCACCTGGCC CCCAACGGCG CGGTGCGGGG CATCCTGGCC
GCCAGGTACA CCCCGCTGGA CTCCGAGCTG GCCGAGGCGG TCCACCAGGC CGGCGCCGAT
ACGCCGCTAC ATCGCCTCTG CGAGCTGGAT CGACGCCTGG CCGACGCCTT CGCCGAGGCC
GCAGACACTA TCCAACGACA GGCCCCCGCC GAACTGCCCG TGGCCGCCAT CGGCTGTCAC
GGGCAGACCG TCTGGCATCA GGGGCGGGAG GCGGGCACCG ACGACGGTGC GAGCAGCGTC
CAGATCGGCG ACCCGAACCG CATCGCCGCT CGGACCGGGC TACCGGTGGT GGCCGACTTC
CGCCGCCGCG ACATCGCCGA GGGCGGGCAC GGCGCGCCGC TGGCCCCGAG CTTCCACGCC
TACTGCTGGG GGGCGGGCGA TGCGGCCTCG GCGGTGGTCA ACCTGGGCGG GATCGCCAAC
CTGACTCTGC TCCCGGCCGG GGCCGGGACG GTGATCGGCT TCGACAGCGG GCCGGCCAAT
ACCCTGCTCG ACGCCTGGGC GCGGCGCCAC CTGGACGCCC GCTTCGACGC CGACGGCGCC
TGGGCGGCCA GTGGCCGCGT GGATCAGGAG CTGCTGGGCC GCCTGCGGGC GGACCCGTAC
TTCGCGCGGC CGCCGCCGAA GAGCACCGGC CCCGAGCACT TCAATCTGGA GTGGCTCCTG
GCGCATCGCC GCGGCGACGA GGATCCGGCG GACGTGCAGG CCACCCTGGC GGAACTCACC
GCCAGCACCG TGGCCGACGC CCTGGGCCGA GGCGGCGACG CGCCCGCTCG GGTGTGGGTC
TGCGGTGGGG GGAGCCACAA CGGGGACCTG ATGCGGCGGC TCCAGGCCCA CTGCCCGGAG
GCCGCGGTGG CGAGCACCGC CGCCCTGGGG ATGGACCCGG ACTACGTGGA GGCGGCGGCC
TTCGCCTGGC TGGCCTGGGC CCGGCTGCAC CACCACCCCG GCAACCTGCC GTCGGTCACC
GGAGCCCGAC GCAGGGCGGT CCTGGGCGGG GTCTACGCAC CGTAA
 
Protein sequence
MSAGDGDAAY VGLMSGTSVD GIDAALLHLA PNGAVRGILA ARYTPLDSEL AEAVHQAGAD 
TPLHRLCELD RRLADAFAEA ADTIQRQAPA ELPVAAIGCH GQTVWHQGRE AGTDDGASSV
QIGDPNRIAA RTGLPVVADF RRRDIAEGGH GAPLAPSFHA YCWGAGDAAS AVVNLGGIAN
LTLLPAGAGT VIGFDSGPAN TLLDAWARRH LDARFDADGA WAASGRVDQE LLGRLRADPY
FARPPPKSTG PEHFNLEWLL AHRRGDEDPA DVQATLAELT ASTVADALGR GGDAPARVWV
CGGGSHNGDL MRRLQAHCPE AAVASTAALG MDPDYVEAAA FAWLAWARLH HHPGNLPSVT
GARRRAVLGG VYAP