Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0872 |
Symbol | |
ID | 4709363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 944626 |
End bp | 945816 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639855332 |
Product | elongation factor Tu |
Protein accession | YP_001002450 |
Protein GI | 121997663 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAGG AAAAGTTCGA GCGCAAGAAG CCGCACATCA ACGTCGGCAC CATCGGTCAC GTCGACCATG GCAAGACGAC GCTGACTGCG GCCCTGACCA AGGTGCTCGC CGAGGCCCAC GGCGGCGACG CCCGTGCGTT CGATCAGATC GACAACGCGC CGGAGGAGCG CGCCCGCGGC ATCACGATTG CCACGGCGCA CGTGGAGTAC GAGTCGGAGT CCCGTCACTA CGCCCACGTT GACTGCCCGG GTCACGCCGA CTACGTCAAG AACATGATCA CCGGCGCGGC GCAGATGGAC GGCTCGATCC TGGTGGTCTC CGCCGCCGAC GGCCCGATGC CGCAGACCCG CGAGCACATC CTGCTCGCCC GTCAGGTCGG CGTCCCGGCG ATCGTGGTCT TCCTGAACAA GGCCGACATG GTCGACGACG CCGAGCTGCT CGAGCTCGTC GAGATGGAGG TCCGGGAGCT GCTCAGCGAC TACGACTTCG ACGGCGACAA CATCCCGGTG GTCACCGGCT CGGCGCTCAA GGCGCTCGAG GGCGACGACT CGGAGATGGG GCGTCCGGCG ATCATCAAGC TCGTCGAGGC GATGGACGCG CACATCCCGC AGCCGGAGCG TCCGGTGGAT GGCGACTTCC TCATGCCCAT TGAGGACGTC TTCTCCATCT CCGGCCGCGG CACGGTGGTG ACCGGTCGTG TCGAGCGCGG TGTCATCAAG GTCGGTGAAG AGGTCGAGAT CGTCGGCATC ACCGACACGC GCAAGACGAC CTGCACCGGC GTCGAGATGT TCCGCAAGCT GCTCGACCAG GGTGAGGCCG GTGATAACAT CGGCGCGCTG CTGCGTGGCA TCAAGCGCGA CGACGTCGAG CGCGGCCAGG TGCTGTGCAA GCCGAAGTCG ATCACGCCGC ACACGCACTT CGAGGCCGAG GTCTACGTCC TGAGCAAGGA CGAGGGTGGC CGGCACACGC CGTTCTTCAA CGGCTACCGT CCGCAGTTCT ACTTCCGGAC GACGGACGTC ACGGGTACGG TGACGCTGCC GGAGGGCACC GAGATGGTGA TGCCGGGCGA CAACGTCAAG ATGACGGTTC AGCTGATCGC CCCGATCGCC ATGGAGGACG GCCTGCGCTT CGCGATTCGC GAGGGTGGCC GCACCGTCGG CGCCGGCGTC GTCTCCAAGA TCCTCGACTG A
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Protein sequence | MSKEKFERKK PHINVGTIGH VDHGKTTLTA ALTKVLAEAH GGDARAFDQI DNAPEERARG ITIATAHVEY ESESRHYAHV DCPGHADYVK NMITGAAQMD GSILVVSAAD GPMPQTREHI LLARQVGVPA IVVFLNKADM VDDAELLELV EMEVRELLSD YDFDGDNIPV VTGSALKALE GDDSEMGRPA IIKLVEAMDA HIPQPERPVD GDFLMPIEDV FSISGRGTVV TGRVERGVIK VGEEVEIVGI TDTRKTTCTG VEMFRKLLDQ GEAGDNIGAL LRGIKRDDVE RGQVLCKPKS ITPHTHFEAE VYVLSKDEGG RHTPFFNGYR PQFYFRTTDV TGTVTLPEGT EMVMPGDNVK MTVQLIAPIA MEDGLRFAIR EGGRTVGAGV VSKILD
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