Gene Hhal_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0862 
Symbol 
ID4709948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp931216 
End bp931683 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content67% 
IMG OID639855321 
Product30S ribosomal protein S7 
Protein accessionYP_001002440 
Protein GI121997653 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.618723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAGGA GACGAGAAGT ACCCAAGCGC AAGGTCCTAC CCGATCCCAA GTACGGGAGT 
GAGGTCCTGA CCAAGTTCGT CAACATGGTC ATGAGCGACG GCAAGCGCTC GGTGGCCGAG 
CGGATCCTGT ACGGCGCCCT GGAGCGCATC GGGTCCAAGC ACGACGATCC GATCGAGGTC 
ATGGAGACCG CGCTCGAGAA CGTCAAGCCG CGGGTCGAGG TCAAGTCCCG GCGCGTGGGC 
GGCGCCACCT ACCAGGTTCC GGTCGAGGTC CGCCCGGAGC GGCGCCAGAC CCTCGCCATG 
CGCTGGCTGC TCGAGGCGGC CCGCAAGCGC GGCGAGAAGA CCATGGCCGC GCGCATGGCC 
AACGAGATGC TAGAGGCGGC GGAGAGTCGC GGGACGGCGG TCAAGAAGCG TGAAGACACG 
CACCGCATGG CCGAGGCCAA CAAGGCCTTC TCGCACTACC GCTGGTAA
 
Protein sequence
MPRRREVPKR KVLPDPKYGS EVLTKFVNMV MSDGKRSVAE RILYGALERI GSKHDDPIEV 
METALENVKP RVEVKSRRVG GATYQVPVEV RPERRQTLAM RWLLEAARKR GEKTMAARMA 
NEMLEAAESR GTAVKKREDT HRMAEANKAF SHYRW