Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0857 |
Symbol | rplD |
ID | 4709857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 926055 |
End bp | 926672 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639855316 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_001002435 |
Protein GI | 121997648 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTCA AGCTCAGTAA CGAAAAGGGC GAAGCGGCAG GCCAGCTCGA GGTCTCGGAC CAGGCCTTCG ACGCGCCGTT CCGCGAATCG CTCGTCCACC AGGTGGTCAC TGCCCACCTC GCCGGGGCGC GTGCCGGGAC CAAGGCACAG AAGACCCGCA GCGAGGTGGC CGGCGGCGGC AAGAAGCCCT GGCGTCAAAA GGGCACGGGC AACGCCCGGG CCGGCACCAT CCGCAGCCCG CTGTGGCGCG GTGGTGGCCA GACCTTCGCG GCCAAGCCGC GGGACTTCTC CCAGAAGGTC AACCGCAAGA TGTATCGCGG CGCCTTGCGC TCGATCCTGT CCGAGCTGGC CCGCCAGGAC CGCCTGGTGG TCGTCAAGCA GTTGACGGTC GACGCGCCCA AGACCCGCGA GCTCAAGGCG CGCCTGGAGG GGCTCGGCGT GCGCGAGGGC CTGATCGTGG TTGACGAGAT CGACGCCAAC CTCGAGCTGG CGGCCCGCAA CCTGCCGCGT CTGGGCGTGG TCGACGCCGC CGGCGTCGAT CCGGCGAGCC TGGTCGGCGC CGAGCGGGTG GTGATCACCG AGTCCGCCAT CCGCCGTGTC GAGGAGTGGC TGTCATGA
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Protein sequence | MELKLSNEKG EAAGQLEVSD QAFDAPFRES LVHQVVTAHL AGARAGTKAQ KTRSEVAGGG KKPWRQKGTG NARAGTIRSP LWRGGGQTFA AKPRDFSQKV NRKMYRGALR SILSELARQD RLVVVKQLTV DAPKTRELKA RLEGLGVREG LIVVDEIDAN LELAARNLPR LGVVDAAGVD PASLVGAERV VITESAIRRV EEWLS
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